Camelina sativa (false flax): 104778724
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Entry
104778724 CDS
T05044
Name
(RefSeq) ALG-2 interacting protein X-like
KO
K12200
programmed cell death 6-interacting protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat03250
Viral life cycle - HIV-1
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104778724
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104778724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104778724
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104778724
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
104778724
Exosome [BR:
csat04147
]
Exosomal proteins
Proteins found in most exosomes
104778724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
104778724
NCBI-ProteinID:
XP_019095280
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Position
3:complement(6901037..6908768)
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AA seq
646 aa
AA seq
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MASSALSNLMLAIHEKKTNSVDLYRPFRNYVTFTYSEREAQLIDDDLETQKQKSTQQNIH
LEKAAVLFNLGAAYSQIGLGHDRTTVDGRRQASHAFIAAAGAFVYLKDNLSSKAAIGQSL
TVDLSVDCVGMLERLMLAQAQECVFENTIAKGSTPGVSAKIARQVGIFYEEAFAALTTSP
LKEHFEKGWISHVQLKAALFYSEACFSRLAEAKKSSRGAPAQLIEAMNTLESSINVNLDR
AVKENDRVYLMRVPSPSSLSPLPAFSMVKPMNMTEILDASKEKMFAILVPDSSAKALSRY
TEMVDDVIRTQAERLQQASELTRVRLKEMDLPDSILAVDGNSALPVDLKEDVEAVQISGG
PAGLEAELQQLRDLKRVNQELLVHTEELLQKEATEDSQFRSQFGTRWTRPQSSTLTKNLQ
DRLNRFAANLKQAGESDVKIERSVRDNFALMSILDRRPIESAIPTLARPIMSLDATEDAI
VGTLKQSLRQLENLGAQRAGLEDMLKDMKRKDDILPKLMTITGSYEDMFRKEISKYDHIC
EDISQNIEVQEQLLMQIQAQNEEFSTLFNLEDYKASKDKCYKQIQAAIMKYREIKENINE
GLKFYVTLQVSFFSLYTIVASSSLSMLVYIMPLLWMALVHSDFTFH
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtcggcgctctctaatctgatgctcgccattcatgagaagaagacgaactcc
gttgatctctaccgtcctttccgcaactacgttactttcacctactctgagcgcgaggct
cagcttatagacgacgatcttgaaacccaaaagcaaaagtctactcagcagaacattcat
cttgagaaagccgctgttctcttcaatcttggtgctgcgtatagccagattggactcggt
catgaccgcaccaccgtggatgggcgtcgtcaggcttcacatgcgttcatcgctgctgca
ggtgcgtttgtgtacttgaaggataatttgtcatctaaggcggcgattgggcagagcctc
accgtggatttgtcggtggactgcgtgggaatgttggaacggttgatgcttgcgcaagct
caagaatgtgtgtttgaaaacaccattgccaaaggaagcacccctggtgtttctgctaaa
attgctaggcaggttggcatattttatgaggaagctttcgctgccctaaccacttcacca
ttgaaggaacatttcgagaaaggctggatttctcatgtgcagctgaaagcagcgctcttc
tatagtgaagcttgttttagccgtttggcagaagcaaagaagtcttcaaggggagcccct
gctcagcttatagaagcgatgaacacactagagtcgagcattaatgtcaatttggatagg
gctgtcaaggaaaacgacagagtgtacctcatgagagttccttctccttcttctttatct
ccacttcccgcgttctcaatggttaagccaatgaacatgactgagatattggatgcaagc
aaggaaaagatgtttgcaatccttgttccagacagcagtgcaaaggctctctctagatac
actgagatggtcgatgatgtaattagaactcaggcggagagattacagcaagctagcgaa
ctaactcgagttaggcttaaagagatggatcttccagattctattcttgctgtggatggt
aattctgctcttcctgttgatcttaaagaagatgtagaagctgttcagatcagtggtggt
ccagctggcttggaagctgaactgcagcagcttagggatttgaagagggttaatcaggaa
ctgttggtgcacaccgaagagcttttgcagaaagaagcaactgaagactctcagttcaga
agtcaatttgggactcggtggactaggcctcaatctagcacactgactaagaacttgcaa
gataggcttaatcggtttgcagccaatttgaaacaagctggagaaagtgatgtgaagatt
gagcgatccgtgagagataatttcgccctcatgtctattcttgatcgacggccgatagag
tctgctatcccaactctagctaggccaataatgtctctggacgcaacagaggatgctatt
gtgggaactctgaagcagagtctgaggcaactggaaaatcttggtgctcagcgggcaggt
cttgaagacatgctcaaagacatgaaaagaaaagatgacatactgccaaagctgatgaca
attacaggctcctatgaagatatgttcaggaaagagatatcaaagtatgatcacatttgt
gaagatatttcccaaaacattgaagttcaagaacaattactgatgcaaattcaggctcaa
aatgaggagttctcaactcttttcaatcttgaagattataaagcatccaaggataagtgc
tacaagcagattcaagctgccataatgaagtatcgagagatcaaggagaacatcaatgag
ggcctgaagttctatgtcactctccaagtgagtttcttttctctatatacaatagtagcc
agctcttcactgtctatgcttgtctacattatgccacttctctggatggctctcgtccat
tctgattttacattccattga
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