KEGG   Camelina sativa (false flax): 104778891
Entry
104778891         CDS       T05044                                 
Name
(RefSeq) THO complex subunit 2-like
  KO
K12879  THO complex subunit 2
Organism
csat  Camelina sativa (false flax)
Pathway
csat03013  Nucleocytoplasmic transport
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104778891
  09122 Translation
   03013 Nucleocytoplasmic transport
    104778891
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104778891
   03041 Spliceosome [BR:csat03041]
    104778891
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     104778891
Spliceosome [BR:csat03041]
 Complex C
  Other components
   EJC/TREX
    104778891
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104778891
SSDB
Motif
Pfam: Tho2 Mua
Other DBs
NCBI-GeneID: 104778891
NCBI-ProteinID: XP_019099215
UniProt: A0ABM1RJM7
LinkDB
Position
3
AA seq 1126 aa
MELRGLFQYLVNQLKRGQGIELVLLQELVQQMANVQYTENLTEDQLDAMAGSETLRYHAT
SFGMTRNNKALIKSSNRLRDSLLPNDEPKLAIPLLILIAQHRSLVVVNADAPYIKMVTEQ
FDRCHGILLQYVDFLSSAVSPATAYARLVPSLDELVHTYHLEPEVAFLVFRPVMRLFKCR
RNGDVSWPLDSGESMDADSEISESESSMILDVGASEKAVTWSDVLDTVRTMLPSKAWNSL
SPDLYATFWGLTLYDLHVPRNRYESEISKQHAALKTLEEVADNSSSAITKRKKEKERIQE
SLDRLTGELKKHEEHVASVRRRLSREKDTWLSSCPDTLKINMEFLQRCIFPRCTFSMADS
VYCAMFVHMLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEVGRLGRFLFETLKIAYH
WKSKESVYEHECGNMPGFAVYYRYPNSQRVTFGQFVKVHWKWSGRITRLLIQCLESNEYM
EIRNALIMLTKISGVFPVTRKTGINLEKRVAKIKNDEREDLKVLATGVAAALSARKPHWV
TDEEFSMGFLELKAPPVHAPKHASSQNGLLIGVSHGEPTGERASVNQQTESGGLGKDQLL
KTKPLDGRTDSLPSKSDQGNLKSKGGNPLDAQSSMSKKSVEQKETDETPKISDENPVKAA
SKYSETELKPSSKRSASVNKSTKQDFGKDDGKSGKAGGRTSTTEKDLIYLESRQSGLTKS
ISSTAANGSIAIGSSKVKDDGAEASDAQKQSSRTVHSPRHEIVSSVRSSDRLQKRTNAVE
DSERISKRRKGDAEHREHDSEPRSSDRDRSTDARLDLNKTVTDDQSTHRDQDRSKDKGNE
RQDRDHRERVERSDKPRGDDVEKARDKSLERHGRERSVEKGLDKGTTRSYDRNKDERNKD
DRSKLRHGEASLEKSHSDDHFHSQGLPPPPPLPPNIVPHSMAAKEDLERRAGGSRHSQRL
SPRHEERERRGSEENSSVSVDDAKRRRDDDFRDRKRDDRESITVKGEEREREREKSLPLK
EDFEASKRRKLKREQQVSSAEPGEYSPMPPHQSSLSTGMGPSSYEGRERKSSSMIQHGGY
LEEPSIRLVGKEASSKMARRDPEPMYDREWEEEKRQRAERKRRDRK
NT seq 3381 nt   +upstreamnt  +downstreamnt
atggagttaaggggtcttttccagtatctcgtgaaccagttaaagaggggccaagggatt
gagcttgttcttcttcaggaactggtccagcagatggcaaatgtacaatacactgagaac
cttactgaagatcagttggatgccatggcaggaagtgagactttacgttatcatgcaaca
tcctttggcatgacgaggaacaacaaggcacttatcaaatcatcaaaccgtctacgagat
tccttacttccaaatgatgaaccaaagttagctatcccccttttgatacttatcgcccag
catcgttctctagttgtggtgaatgcggatgccccatatattaagatggtcactgaacag
ttcgacagatgtcatggaattctcctccaatacgtggacttcctttctagtgctgtcagt
cctgctactgcttatgctcggctggtaccttcgcttgatgagcttgttcacacataccat
ctcgagccagaggtcgcttttttggtatttcgccctgtgatgaggctcttcaagtgtcga
cggaatggtgatgtttcatggcctttggatagtggggaatctatggatgcggattctgaa
atatcagagtctgagagttctatgattctcgatgtcggtgcatctgaaaaagctgtaacg
tggtctgatgttcttgatactgtaagaacaatgctgccgtcaaaagcttggaatagtcta
tcgccagacctctacgctactttttggggacttacgctttatgatctccatgttcccaga
aatcgttatgagtctgagatatctaaacagcatgctgcccttaagacacttgaagaggtt
gctgataattctagctcagcaattacgaagagaaaaaaagagaaggaaaggattcaagag
tcacttgatcgtctaaccggtgaactgaaaaagcatgaagaacatgttgcttctgtccgt
agaaggctttcacgtgaaaaggatacatggttgagttcctgtcctgatactttgaagatc
aatatggagttcctgcaacgttgtattttccctcggtgcacatttagcatggcagattct
gtgtactgcgcgatgtttgtacatatgctccactctcttggaacacccttttttaacact
gtcaatcacattgatgttctgatttgtaaaacgctgcaaccaatgatctgctgctgcact
gaatatgaagttggaagacttgggaggtttttgtttgagaccttgaagattgcataccac
tggaagagtaaggaatcagtctatgaacatgagtgcggaaatatgccagggtttgctgtt
tattacagatacccgaacagccagcgtgtcacatttggacaatttgtgaaggtacactgg
aaatggagtggaagaatcacacggcttttgatccagtgtctggagtctaacgagtatatg
gagattcgtaatgccctaattatgctaacaaaaatatctggtgttttccctgttactcgg
aaaactgggataaaccttgagaaacgggtagccaagattaaaaatgatgaacgagaggac
cttaaggtcttagcaactggtgttgccgcagctctgtctgcaagaaaaccacattgggtt
acagatgaagaatttagcatgggcttccttgaactaaaggccccgccagtacatgctcca
aaacatgcttcttcccagaatggcttgttaattggtgtctcccatggtgaaccaactggg
gaaagagcaagtgttaaccagcagactgagtctggtggattgggcaaggaccagttattg
aaaactaaacctctagatggaagaacggacagtttaccttcaaaatctgatcaaggaaat
cttaaatcaaaggggggcaatccattggatgcccaatcatccatgtctaagaagtcagtg
gaacaaaaggaaacagatgaaacacccaaaatatctgatgaaaatcctgtcaaagctgct
tcaaagtattctgaaaccgagttaaaaccttcctctaaacgaagtgcatcagtgaacaaa
tctacaaagcaagattttgggaaagatgatggaaagtccggtaaagctggtggaagaaca
tccacaactgaaaaagatcttatttatttggagagcaggcaatcaggtttgaccaaatct
atttccagcacagcagccaatggtagcatagctattggttcgtccaaagtaaaagacgac
ggtgctgaagcttcggatgcacaaaagcaatcttctcggactgttcattcccctcggcat
gaaatcgtctcttctgtgagatcgagtgataggttacagaaacgaactaatgctgttgaa
gatagtgagagaataagtaaacgtcgtaaaggagatgctgagcacagagagcatgacagt
gagcctcgatcaagtgatcgagatagatcaacagacgctcggttggatttaaacaaaaca
gttactgatgaccaaagcacacatagggatcaagatagatcaaaggataagggtaatgaa
agacaggaccgagaccatagagaaagagttgagcgttctgataaacctcgcggagatgat
gtagagaaagcaagagacaaatctttggagcgtcatggtagagagcgatctgttgagaag
ggtctagataaaggaacaactaggagttatgatagaaacaaggatgaaagaaacaaagat
gatagaagcaaactgcgtcatggtgaggcatcactagagaaatctcattctgatgatcat
tttcattctcaaggtttacccccacctccacctttaccacctaacatcgttccacattct
atggctgcaaaagaagacctcgaaagaagggctggaggttcaaggcattctcagaggctt
tccccgaggcatgaagaaagagagagacgaggctctgaagagaattcatcagtttctgtg
gatgatgcaaaacgtagaagagatgacgatttccgtgaccgaaagcgagatgaccgagaa
tcaatcaccgtgaagggtgaagaaagagaaagagaaagagaaaaaagcctccctttgaaa
gaggattttgaagcatccaagagaaggaagcttaagagggagcaacaggtttcatctgca
gagccaggggaatattctcccatgccaccacatcaatcctctttatcgactggtatggga
ccatcatcttacgaaggcagagagcgaaagagcagtagtatgattcaacacggaggttat
cttgaagagccaagcatcagacttgttggaaaagaagcttccagcaagatggctcgccgt
gatcccgaaccaatgtatgaccgtgaatgggaagaggagaagaggcagagagcagaacgg
aagcggagagatcggaagtag

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