Camelina sativa (false flax): 104778891
Help
Entry
104778891 CDS
T05044
Name
(RefSeq) THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104778891
09122 Translation
03013 Nucleocytoplasmic transport
104778891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104778891
03041 Spliceosome [BR:
csat03041
]
104778891
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104778891
Spliceosome [BR:
csat03041
]
Complex C
Other components
EJC/TREX
104778891
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104778891
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
Mua
Motif
Other DBs
NCBI-GeneID:
104778891
NCBI-ProteinID:
XP_019099215
UniProt:
A0ABM1RJM7
LinkDB
All DBs
Position
3
Genome browser
AA seq
1126 aa
AA seq
DB search
MELRGLFQYLVNQLKRGQGIELVLLQELVQQMANVQYTENLTEDQLDAMAGSETLRYHAT
SFGMTRNNKALIKSSNRLRDSLLPNDEPKLAIPLLILIAQHRSLVVVNADAPYIKMVTEQ
FDRCHGILLQYVDFLSSAVSPATAYARLVPSLDELVHTYHLEPEVAFLVFRPVMRLFKCR
RNGDVSWPLDSGESMDADSEISESESSMILDVGASEKAVTWSDVLDTVRTMLPSKAWNSL
SPDLYATFWGLTLYDLHVPRNRYESEISKQHAALKTLEEVADNSSSAITKRKKEKERIQE
SLDRLTGELKKHEEHVASVRRRLSREKDTWLSSCPDTLKINMEFLQRCIFPRCTFSMADS
VYCAMFVHMLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEVGRLGRFLFETLKIAYH
WKSKESVYEHECGNMPGFAVYYRYPNSQRVTFGQFVKVHWKWSGRITRLLIQCLESNEYM
EIRNALIMLTKISGVFPVTRKTGINLEKRVAKIKNDEREDLKVLATGVAAALSARKPHWV
TDEEFSMGFLELKAPPVHAPKHASSQNGLLIGVSHGEPTGERASVNQQTESGGLGKDQLL
KTKPLDGRTDSLPSKSDQGNLKSKGGNPLDAQSSMSKKSVEQKETDETPKISDENPVKAA
SKYSETELKPSSKRSASVNKSTKQDFGKDDGKSGKAGGRTSTTEKDLIYLESRQSGLTKS
ISSTAANGSIAIGSSKVKDDGAEASDAQKQSSRTVHSPRHEIVSSVRSSDRLQKRTNAVE
DSERISKRRKGDAEHREHDSEPRSSDRDRSTDARLDLNKTVTDDQSTHRDQDRSKDKGNE
RQDRDHRERVERSDKPRGDDVEKARDKSLERHGRERSVEKGLDKGTTRSYDRNKDERNKD
DRSKLRHGEASLEKSHSDDHFHSQGLPPPPPLPPNIVPHSMAAKEDLERRAGGSRHSQRL
SPRHEERERRGSEENSSVSVDDAKRRRDDDFRDRKRDDRESITVKGEEREREREKSLPLK
EDFEASKRRKLKREQQVSSAEPGEYSPMPPHQSSLSTGMGPSSYEGRERKSSSMIQHGGY
LEEPSIRLVGKEASSKMARRDPEPMYDREWEEEKRQRAERKRRDRK
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggagttaaggggtcttttccagtatctcgtgaaccagttaaagaggggccaagggatt
gagcttgttcttcttcaggaactggtccagcagatggcaaatgtacaatacactgagaac
cttactgaagatcagttggatgccatggcaggaagtgagactttacgttatcatgcaaca
tcctttggcatgacgaggaacaacaaggcacttatcaaatcatcaaaccgtctacgagat
tccttacttccaaatgatgaaccaaagttagctatcccccttttgatacttatcgcccag
catcgttctctagttgtggtgaatgcggatgccccatatattaagatggtcactgaacag
ttcgacagatgtcatggaattctcctccaatacgtggacttcctttctagtgctgtcagt
cctgctactgcttatgctcggctggtaccttcgcttgatgagcttgttcacacataccat
ctcgagccagaggtcgcttttttggtatttcgccctgtgatgaggctcttcaagtgtcga
cggaatggtgatgtttcatggcctttggatagtggggaatctatggatgcggattctgaa
atatcagagtctgagagttctatgattctcgatgtcggtgcatctgaaaaagctgtaacg
tggtctgatgttcttgatactgtaagaacaatgctgccgtcaaaagcttggaatagtcta
tcgccagacctctacgctactttttggggacttacgctttatgatctccatgttcccaga
aatcgttatgagtctgagatatctaaacagcatgctgcccttaagacacttgaagaggtt
gctgataattctagctcagcaattacgaagagaaaaaaagagaaggaaaggattcaagag
tcacttgatcgtctaaccggtgaactgaaaaagcatgaagaacatgttgcttctgtccgt
agaaggctttcacgtgaaaaggatacatggttgagttcctgtcctgatactttgaagatc
aatatggagttcctgcaacgttgtattttccctcggtgcacatttagcatggcagattct
gtgtactgcgcgatgtttgtacatatgctccactctcttggaacacccttttttaacact
gtcaatcacattgatgttctgatttgtaaaacgctgcaaccaatgatctgctgctgcact
gaatatgaagttggaagacttgggaggtttttgtttgagaccttgaagattgcataccac
tggaagagtaaggaatcagtctatgaacatgagtgcggaaatatgccagggtttgctgtt
tattacagatacccgaacagccagcgtgtcacatttggacaatttgtgaaggtacactgg
aaatggagtggaagaatcacacggcttttgatccagtgtctggagtctaacgagtatatg
gagattcgtaatgccctaattatgctaacaaaaatatctggtgttttccctgttactcgg
aaaactgggataaaccttgagaaacgggtagccaagattaaaaatgatgaacgagaggac
cttaaggtcttagcaactggtgttgccgcagctctgtctgcaagaaaaccacattgggtt
acagatgaagaatttagcatgggcttccttgaactaaaggccccgccagtacatgctcca
aaacatgcttcttcccagaatggcttgttaattggtgtctcccatggtgaaccaactggg
gaaagagcaagtgttaaccagcagactgagtctggtggattgggcaaggaccagttattg
aaaactaaacctctagatggaagaacggacagtttaccttcaaaatctgatcaaggaaat
cttaaatcaaaggggggcaatccattggatgcccaatcatccatgtctaagaagtcagtg
gaacaaaaggaaacagatgaaacacccaaaatatctgatgaaaatcctgtcaaagctgct
tcaaagtattctgaaaccgagttaaaaccttcctctaaacgaagtgcatcagtgaacaaa
tctacaaagcaagattttgggaaagatgatggaaagtccggtaaagctggtggaagaaca
tccacaactgaaaaagatcttatttatttggagagcaggcaatcaggtttgaccaaatct
atttccagcacagcagccaatggtagcatagctattggttcgtccaaagtaaaagacgac
ggtgctgaagcttcggatgcacaaaagcaatcttctcggactgttcattcccctcggcat
gaaatcgtctcttctgtgagatcgagtgataggttacagaaacgaactaatgctgttgaa
gatagtgagagaataagtaaacgtcgtaaaggagatgctgagcacagagagcatgacagt
gagcctcgatcaagtgatcgagatagatcaacagacgctcggttggatttaaacaaaaca
gttactgatgaccaaagcacacatagggatcaagatagatcaaaggataagggtaatgaa
agacaggaccgagaccatagagaaagagttgagcgttctgataaacctcgcggagatgat
gtagagaaagcaagagacaaatctttggagcgtcatggtagagagcgatctgttgagaag
ggtctagataaaggaacaactaggagttatgatagaaacaaggatgaaagaaacaaagat
gatagaagcaaactgcgtcatggtgaggcatcactagagaaatctcattctgatgatcat
tttcattctcaaggtttacccccacctccacctttaccacctaacatcgttccacattct
atggctgcaaaagaagacctcgaaagaagggctggaggttcaaggcattctcagaggctt
tccccgaggcatgaagaaagagagagacgaggctctgaagagaattcatcagtttctgtg
gatgatgcaaaacgtagaagagatgacgatttccgtgaccgaaagcgagatgaccgagaa
tcaatcaccgtgaagggtgaagaaagagaaagagaaagagaaaaaagcctccctttgaaa
gaggattttgaagcatccaagagaaggaagcttaagagggagcaacaggtttcatctgca
gagccaggggaatattctcccatgccaccacatcaatcctctttatcgactggtatggga
ccatcatcttacgaaggcagagagcgaaagagcagtagtatgattcaacacggaggttat
cttgaagagccaagcatcagacttgttggaaaagaagcttccagcaagatggctcgccgt
gatcccgaaccaatgtatgaccgtgaatgggaagaggagaagaggcagagagcagaacgg
aagcggagagatcggaagtag
DBGET
integrated database retrieval system