Camelina sativa (false flax): 104778956
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Entry
104778956 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104778956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104778956
03036 Chromosome and associated proteins [BR:
csat03036
]
104778956
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104778956
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104778956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
104778956
NCBI-ProteinID:
XP_010465298
LinkDB
All DBs
Position
15:6446084..6454239
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AA seq
1077 aa
AA seq
DB search
MDMDMDTSPSYFDPEVLTVRDQFRRYRKRHSASPHEEVLSSNVRENRLLYDGHNIHSPTN
TALLLENIKEEVDNFHTDHYEGTHTNPLSASRTESVGILDDDNEASFRRVESQSLKACKI
ENDELAESGDTTFALFASLIDSALQGLMAIPDLILRLEESCRHVSQSIRYGSDIRHRVVE
DKLMRQKAQLLLGEAASWSLLWNLYGKVTEQVPKELSLVPSTSHLEACRFVVNDHTAQLC
LRIVMWLEEMASKSLDLERKVRGSHVGTYLPNAGVWHHTQRYLKKNGSVGDTVHHLDFDA
PTREHARILPDDNKQDESVLEDVWTLIRAGRIEEACDLCRSAGQPWRAATLCAFSGMDMF
PSVEALTKNGKNRTLQAIEQESGFGNQLRLWKWASYCASEKIAEQDGGKHEVAVFATQCS
NLNRMLPVCTDWESACWAMAKSWLDVQVDLELAQSKPGLTEKFRSCIDESPETMQNGYQA
SLGQEDWPLHVLNQQPRDLPALLQKLHSGEMVHEAVVRGCKEQHRQIQMNLMLGDISHLL
DIIWSWIAPLDDDQSNFRPHGDPHMIKFGAHVVLVIRLLFADEINDSFSEKLNNVGDLIL
HMYAMFLFSKQHEELVGIYASQLAPHRCIELFVHMMELRMHSSVHVKYKIFLSAMEYLPF
SPVNDTKGNFEEIVDRVLSRSREIKLAKYDPSVDVAEQHRQQSLQKAIAIQWLCFTPPST
IKDVKDVTSKLLLRSLMHSNILFREFALIAMWRVPATPVGAHTLLSFLAEPLKQLSENPD
TLEDYVSENLQEFQDWNEYYSCDAKYRNWLKFQLENAEVTELSEEENQRAVVAAKETLDS
SLALLLRRDNPWMTFLEDHVFESEEYLFLELHATAMLCLPSGECLRPDATVCAALMSALY
SSVSEEVVLDRQLMVNVSISSRDSYCIEVVLRCLAIKGDGLGPHNANDGGILSAVAAAGF
KGELTRFQAGVTMDISRLDAWYSSKEGSLETPATYIVRGLCRRCCLPELVLRSMQVSVSL
MESGNPPEDHDELIELVASDETGFLSLFSRQQLQEFMLFEREYRMSQLELQEELSTS
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggacatggatatggacacttcccctagctacttcgaccccgaggttctcactgttagg
gatcagttccgtcgttatcgaaagagacactctgcatcaccacatgaggaagtcttgagt
tcgaatgtccgggagaacagattactgtatgatgggcataacatccatagtccaacaaat
actgctttgcttcttgaaaacattaaggaggaggttgacaattttcacaccgatcattat
gaaggaacacatacaaacccattatctgcttccaggacagagagtgttggaattctggat
gatgataacgaggcttcgtttcgtcgagtggaaagtcaatcactcaaggcttgcaagatt
gagaatgatgagttagccgagagtggagatacaacttttgctttgtttgcttccctaatt
gattctgcacttcaaggactaatggccattccagatctaatattgagacttgaggaatca
tgcaggcatgtttcacaatctattagatatggatcagatattagacatcgtgttgtggag
gataaacttatgagacagaaggctcagcttttgcttggtgaggctgcctcctggtcactt
ttatggaacctatatggaaaagttactgaacaagttccgaaggaattgagcctggtgcca
tcaacatctcatttggaggcttgtcggtttgttgtaaatgaccatacagctcaactatgc
cttcggatagtcatgtggcttgaagaaatggcttcaaaatcacttgacttggaaagaaag
gtgcggggatctcatgtgggtacttatcttccgaacgctggagtgtggcatcacacacaa
agatatctcaagaaaaatggctctgtcggtgacactgtacaccatctggattttgacgct
ccaacacgtgaacatgctcgtattcttcctgatgacaataaacaagatgaatctgttctt
gaagatgtttggactttgataagggctgggagaatagaagaggcatgtgatctctgcagg
tccgctgggcagccatggagagctgcaactttatgcgctttttctggaatggacatgttt
ccttctgttgaggcattaacaaagaatgggaaaaataggactctccaggccattgagcag
gaaagtggctttggcaatcaactgcgtctttggaaatgggcgtcctactgtgcatcggag
aaaattgcagagcaggatggcggcaaacatgaagttgctgtttttgcaacacaatgtagc
aacctgaaccgcatgttaccagtttgtaccgattgggagtcagcttgctgggctatggcg
aaatcttggcttgatgttcaggttgatcttgaactcgcccaatcaaagccagggttgaca
gaaaagtttagaagctgcattgatgaaagcccggaaactatgcaaaatggttatcaggct
tcacttgggcaagaagattggcccctccatgttctaaaccaacaaccccgtgaccttcct
gctcttcttcagaaactccattcaggggaaatggtgcacgaagctgttgtcagaggatgc
aaagagcagcaccggcaaattcagatgaaccttatgttgggcgatatatcacatcttctt
gatatcatatggtcatggatagcgcccttagacgatgatcaaagcaacttcaggccccat
ggagatcctcatatgataaagttcggtgcccatgtggtgcttgttattaggcttctattt
gctgatgaaatcaacgactctttcagtgagaagctcaataatgttggtgatcttattctt
catatgtatgcgatgtttctattttcaaaacaacatgaagaattagtaggaatttatgct
tcccagcttgctcctcatcgatgcattgaactttttgtacacatgatggagctaaggatg
catagcagcgtacatgtgaagtacaaaatcttcctgtccgctatggaatacttgccattt
tctcctgtgaatgacactaaaggaaattttgaagaaatagttgacagggttttgtcaaga
tctcgggaaatcaaacttgcaaaatatgatccctcagttgatgttgcggagcagcatcgt
cagcagagtcttcaaaaagccatagcgattcagtggctctgttttacacctccatctact
ataaaggatgtcaaggatgttacttccaaattactattgcgatctttgatgcacagcaac
atacttttcagagagtttgctttgatcgccatgtggagggtgcctgcaactcccgtgggt
gcacacacgcttcttagttttcttgctgaacctctgaagcaactctcagaaaatccagat
acccttgaggactatgtttccgagaatttgcaagagttccaagactggaatgaatattat
tcctgtgatgcaaaatatcgcaactggctcaaattccaattagagaatgctgaagtcact
gaactgtcagaagaggaaaatcagagggctgttgtagcagccaaagagactctggattct
tctttggcattgctcctcagacgagacaatccctggatgacatttctcgaagaccatgta
ttcgaatcagaagaatatttgttccttgaattgcatgcaactgcgatgctctgtttgcct
tctggtgaatgtttgcgcccagatgccactgtttgtgctgcattaatgagtgcactttac
tcttctgttagtgaggaagttgttttagatcgccagttaatggtcaatgtatcgatttct
tcaagggacagctactgcatcgaggttgtgctccggtgtttagcaattaagggtgatgga
cttgggccacataatgcaaatgacggtggtattctaagtgcagtggctgcagctggtttt
aaaggtgagcttacccgtttccaagcaggtgttacaatggatatatcccgcctagacgct
tggtattcaagcaaagaaggctcgcttgaaacacctgcaacgtatattgtccggggtctc
tgtagaagatgctgtcttccagagctcgttcttcgatcgatgcaggtttctgtttctctg
atggagtcgggaaatccacctgaagatcatgatgaactgattgagcttgtggcttctgat
gaaactgggtttctctctttgttcagtcggcaacaattacaggagttcatgttgtttgag
agagagtatcgtatgtcccagttggagcttcaggaggaactttcaacatcatga
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