Camelina sativa (false flax): 104779497
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Entry
104779497 CDS
T05044
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II isoform X1
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104779497
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
104779497
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GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
104779497
NCBI-ProteinID:
XP_010502163
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Position
4:1142979..1149026
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AA seq
624 aa
AA seq
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MAIDCFVLGAGQEIGKSCVVVTINGKRIMFDCGMHMGCDDHNRYPDFSLLSKSGDFDNVI
SCIIVTHFHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELF
TTTHITNCMKKVIAIDLKQTIQVDEDLQIRAYYAGHVLGAVMVYAKVGDAAIVYTGDYNM
TTDRHLGAAKIDRLQLDLLISESTYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFA
LGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKEKHNTHNPFD
FKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGH
KLMAGKPTTVDLYNGTKVDVRCKIHQVAFSPHTDAKGIMDLTKFLSPKNVVLVHGEKPSM
MILKDKITSELDIPCFVPANGETVSVASTTFVKANASDMFLKSCSNPNLKFSNSTQLRVT
DQRTSDGVLVIEKSKKAKIVYQDEVSELLHEKNHVVSLAYCCPVKAKGESDNDVDLIKQL
SAKILKTVSGAQIHESEDCLQVGSFKGSLCLKEKCMHRPEISSCSEAVFLCCNWSVADLE
LGWEIINVMKLNLDNTCKVKGDLL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgactgttttgtactcggtgctggacaagagattggaaagagctgcgtagtg
gtgacgattaacggtaaaaggataatgtttgattgtgggatgcatatgggctgcgatgat
cacaatcgatacccagatttttctctcctctctaaatccggtgattttgataacgtcatc
tcttgtatcatcgtcactcattttcatatggatcatgttggagcgcttccttacttcacg
gaggtttgtgggtacaatgggccaatttatatgtcgtatcccacaaaggctttgtctcca
ttaatgcttgaggactaccgaagagtaatggtggatagaagaggcgaggaggagctattc
actactacccatataacaaactgcatgaagaaagtaatcgcaatagatttgaagcaaaca
attcaggttgatgaagatcttcaaatccgtgcctattatgcagggcatgtccttggagca
gtcatggtttatgcaaaagtgggagatgcagcaattgtgtacactggagattacaatatg
acaacagatagacatctaggagcagctaaaattgacagactccagttggatcttctcata
tcagagtccacatatgcaactaccattcgcggctcaaaatatccccgggaaagagagttt
cttcaagctgttcataaatgtgttgctggcggagggaaggcactgattccttcatttgct
cttggaagggctcaggaactctgcatgctgcttgatgattactgggagcgtatgaatata
aaggttccaatttacttctcatcaggtttgaccatccaagcaaatatgtattacaaaatg
ctcatcagctggacaagccagaacgttaaagaaaagcacaatacgcataacccatttgat
tttaagaatgttaaagattttgatcggtctcttatacatgctcctgggccatgtgttctc
tttgccacacctggtatgctttgtgctggcttctcacttgaagtgttcaagcactgggct
ccgtctcccttgaatcttgttgccttgcccggatactctgtggctgggaccgttgggcac
aaactgatggctggtaaacccacgaccgttgacctctacaatggcaccaaggtcgatgtc
cgttgcaagatacatcaagtggcattcagtcctcacacagatgcaaaaggaataatggat
ctcacaaagtttctttccccaaagaacgttgtactcgtgcacggcgaaaaacccagcatg
atgattcttaaggataagataacctcagagcttgacatcccctgttttgttcctgccaat
ggtgaaacagtttcagtagcttcaaccacttttgtaaaagcaaacgcttctgatatgttc
cttaaaagctgctccaacccgaatctcaaattctcaaactcgactcagctccgtgttaca
gaccagagaacttcagacggggttttagtaatagagaagagcaaaaaggctaagattgtt
taccaagatgaagtctctgagttgttacatgagaaaaaccatgtggtctctttagcttat
tgttgtccagtgaaagctaagggagaatcagataatgatgttgatctgatcaaacaattg
tctgcaaagatcttgaagacagtgtctggtgctcagatccatgaatctgaagactgtttg
caggtaggatctttcaaggggtctttgtgtctgaaagagaagtgtatgcatcgaccagag
ataagcagttgtagtgaagctgtgttcttgtgttgcaactggtctgttgcagatttagag
cttggctgggaaatcatcaatgtaatgaaactaaatctagataacacctgtaaggtcaaa
ggtgatttattgtaa
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