Camelina sativa (false flax): 104779519
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Entry
104779519 CDS
T05044
Name
(RefSeq) protein SHOOT GRAVITROPISM 5 isoform X1
KO
K25871
zinc finger protein IDD14/15/16
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104779519
Transcription factors [BR:
csat03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104779519
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Gene cluster
GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-met
zf-C2H2
zf-C2H2_6
zf-MYST
zf-C2H2_4
DUF2514
Motif
Other DBs
NCBI-GeneID:
104779519
NCBI-ProteinID:
XP_010502187
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All DBs
Position
4:1487855..1490737
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AA seq
447 aa
AA seq
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MRTYQVMLSNKNTNTCCVVSSSSSDPFLSSSENGVTTTNTSTQKRKRRPAGTPDPDAEVV
SLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKKRVYVCPEP
TCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSC
DCGRVFSRVESFIEHQDNCSVRRVHREQPLPPQTAVPVPACSSRTASTISTPSSETNYGG
AIAVATPIPLEGRPIHQRISPSVLTHSSNNLNLELQLLPLSSNQNPNHQENQQQKVKEPS
HHHNHNHDATNLNLSIAPSSSSYQHYNNFDRIKEIMASEQIMKIAMKEKAYAEEAKREAK
RQREIAENEFANAKKIRQKAQAELERAKFLKEQSMKKISSTIMQVTCQTCKGQFQAVAVP
AAAADETSLVVSYMSSANTDGDFENGF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagaacatatcaagtcatgttgtccaacaagaacactaacacatgttgtgtggtttct
tcttcttcttctgatcctttcctctcttcttcagaaaatggggtcaccaccacaaacaca
tccactcagaagaggaaaagaagacctgcaggtacaccagatccagatgcagaagttgtg
tctttatcaccaagaactcttcttgaatcagacagatacatatgtgagatctgtaaccaa
gggtttcaaagagaccagaatcttcagatgcatagaagacgtcacaaagttccatggaag
cttcttaaaagagacaacaacatagaggtgaagaaacgagtctatgtttgccctgaacca
acttgccttcaccatgatccttgccatgctctcggagatcttgttggtatcaaaaaacat
ttcagaagaaagcacagtaaccataagcaatgggtttgtgagagatgctctaaaggttat
gctgttcaatcagattacaaagctcatctcaaaacttgtggcactagaggacattcttgt
gactgtggtcgcgtcttctccagggtggagagttttattgagcatcaagataactgttcc
gtacggagagttcaccgtgaacagcctctaccgccacaaaccgcagtaccagtcccggcc
tgctcctctagaaccgcttcaaccatcagtactccgtctagtgaaaccaattacggcggt
gcaattgctgttgcgactcctatacctctagaaggccgtccaattcatcagagaatctca
ccttcagttctcactcactcatcaaataatctcaacctcgaactccagcttcttccatta
tcgtcgaatcaaaaccctaaccatcaagaaaaccaacaacaaaaagttaaagaaccatct
catcatcataatcataatcatgatgctacaaacttaaacctctccattgcaccatcatca
tcatcatatcaacattacaataactttgatcgtataaaagagataatggcaagcgagcaa
atcatgaagatagcgatgaaggagaaagcttatgcggaggaagctaaaagagaagcgaag
aggcaacgagagatagcggaaaacgaatttgcgaatgctaagaagattaggcaaaaggca
caagctgagcttgagagagctaagtttttaaaggaacaatctatgaagaaaataagctca
acgatcatgcaagtcacttgtcaaacatgtaaaggacagtttcaagcagttgcggttccg
gcggctgcggctgacgagacatctcttgtggtcagttacatgtcttcagccaataccgac
ggagactttgaaaatggattttaa
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