Camelina sativa (false flax): 104779605
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Entry
104779605 CDS
T05044
Name
(RefSeq) probable pectate lyase 6
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104779605
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104779605
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
104779605
NCBI-ProteinID:
XP_010502279
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Position
4:2414419..2416544
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AA seq
453 aa
AA seq
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MVNLGSYVIVFVSLSLAVAVPSVHAHVAEYDEYWTQRQTEALHQTLESYDPEPLNVTDHF
NYHAALAMETTGTANETRRDLRQVKSGKKRRGGRYESLNAIDKCWRGDKNWDKNRKKLAD
CVLGFGRKTTGGKNGPIYVVTDPSDNDLLDPKPGTLRHAVTRDRPLWIIFARHMIIKLQQ
ELIITNDKTIDGRGVSVYITGGAGLTLQYVRNVIIHNIYIKQIKRGPGGLIRDSEHHFGL
RTMSDGDGINIFGATNVWIDHVSMTDCSDGMIDAIMGSTAITISNSHFTDHDEVMLFGGK
NTDVIDKKMQITVAFNHFGKRLKQRMPRARYGLVHVVNNDYTHWEMYAIGGNMNPTIISQ
GNRFIAPPNEDSKQVTKREYTPYPEWKTWNWQSEKDYFLNGAYFVQSGKANAWSTAPKNP
IPRKFAIRPQPGTKVRRLTKDAGALGCKPGKSC
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatcttgggagctacgttatcgtctttgtctcgttgtctctcgctgtcgctgtt
ccatcggttcatgcccacgtcgccgaatatgatgaatactggacgcagcgtcaaacggaa
gcgttgcatcaaactttggaatcttatgacccggagccccttaatgtcacagaccacttt
aactaccatgccgccttagccatggagacgacggggacagctaacgaaacaaggagggat
ctccgtcaggtcaaaagtggtaagaaaagacgtggaggaaggtatgaatcccttaacgcg
attgacaaatgctggagaggcgacaaaaactgggacaaaaaccggaagaaactagcagac
tgtgtccttggatttggccgcaaaacaaccggaggcaaaaatggaccgatctatgtggtc
actgatccatccgacaacgatctattggacccgaaaccaggaactctaagacacgccgtg
acaagagaccgaccactctggatcatattcgcaagacacatgatcataaaactgcaacaa
gaactgatcataacgaatgataaaacaatcgacggtcggggagtaagtgtttacataacc
gggggtgcaggtttaacgttgcagtacgtgaggaatgtgataatacataatatttatatc
aaacaaattaaacgaggacctggtgggttgattagagactccgagcatcattttgggctt
cggacaatgagtgacggtgatgggattaatatttttggtgcgaccaatgtttggattgat
catgtctcgatgacagattgttctgatgggatgattgatgccatcatgggatcgaccgcg
attactatctccaattcccattttaccgaccacgacgaggtgatgctgtttgggggtaaa
aacacggatgtgatcgacaagaaaatgcagataacagttgcgtttaaccattttggtaag
agattgaagcaaagaatgccaagggccagatacggtttggtccatgttgtgaacaatgac
tacactcactgggaaatgtatgcaattggtggaaacatgaacccgaccattataagtcaa
ggcaatcgtttcattgctcctcctaacgaagattccaaacaggttacaaagagagaatac
acaccttatcctgaatggaaaacatggaactggcaatcagagaaagattatttcctgaat
ggagcttactttgtgcaatcgggaaaagcaaacgcctggagcactgccccgaaaaatcca
atccctagaaagtttgcaatccgacctcaaccaggaacaaaggtcagaagactcacaaag
gatgctggtgcgcttggctgcaaaccaggcaagtcctgctga
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