KEGG   Camelina sativa (false flax): 104779707
Entry
104779707         CDS       T05044                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104779707
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104779707
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104779707
   03041 Spliceosome [BR:csat03041]
    104779707
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104779707
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     104779707
Spliceosome [BR:csat03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    104779707
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 104779707
NCBI-ProteinID: XP_010502407
LinkDB
Position
4:3508079..3509741
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFGQPEAV
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtctggaaggaaagaaacggttttggatttggctaagtttgttgataagggtgtgcaa
gttaagcttactggtggtagacaagtcactggaactcttaaaggctacgatcaattgctc
aatcttgttcttgatgaagcagtagaattcgttagagaccacgatgatcctttgaagact
accgaccagacaagacgccttggtttaattgtttgccgtggaacagcggtcatgctcgtc
tcaccaaccgatggcactgaagaaatcgctaacccatttggtcaaccagaagctgtttaa

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