Camelina sativa (false flax): 104779872
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Entry
104779872 CDS
T05044
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104779872
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
104779872
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104779872
NCBI-ProteinID:
XP_010502593
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Position
4:5414503..5417706
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AA seq
469 aa
AA seq
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MKTIKSSPLLAMLLGVIIVAAAISTISVEGRKHHVKKIKSKHRRHSKTTPSGSPAPAPYP
STHDGVFNILSFGAMGDGLSDDSKALVGAWKAACKVAGGKVDIPAGKQFLVKAVTLQGPC
KDDTVIQIEGTLVAPEKIGSWPKSNLFQWLNFKWVSHVIIQGSGTLNGRGSNWWNLDTYQ
TQSRKYIPPMKPTALRFYASENVTVRDISIVNSPLCHLKFDDSDGVKVNNITISSPENSP
NTDGIHLQNTRNVEIQHSNIACGDDCVSIQTGSSNVHIHHINCGPGHGISIGGLGKDKSV
ACVSDIIVEDISIQNTLAGVRIKTWQGGLGVVKNLTFSNIQVTDVKVPIVIDQYYCDKST
CKNQTRAVSISGVKYNNIVGSFTVQPVRIACSNNVPCMGVDLMDIRLRPSGGIRGLQTHQ
QQQALCWNSYGKTQGPLVPSSIGYCLRKSNIGAYYSQKVARSYDNICPS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaataaagagttcgcctcttttagcaatgctgctcggtgtcattatcgtagcc
gccgccatctccaccatctccgtcgagggtcgtaaacatcacgtcaagaagatcaaatcc
aaacaccgtcgtcattccaaaactaccccttccggctctcccgcaccggctccttacccg
tccacccacgatggcgttttcaacattctctccttcggtgccatgggtgatggactctcc
gacgactcaaaggcattggtcggagcgtggaaggcggcttgcaaagtggccggtgggaaa
gtggatattccggcagggaaacagtttttagtgaaggcagtgacactgcaaggtccgtgc
aaggatgatacggtgattcaaatagaagggaccttagtggctccggagaagatagggtcg
tggcctaagtcaaacttgtttcagtggcttaacttcaaatgggtcagtcacgtgatcatc
caaggctcagggactcttaatggtcgcggctctaactggtggaacttggacacttatcag
actcagtcgagaaagtatatcccaccaatgaaaccaacggcacttaggttttatgcaagt
gagaacgtgacggtccgtgacataagcatcgtgaacagcccactgtgtcatctgaagttc
gatgactcggacggagtcaaagtcaacaacattacgatctcgtcgccggagaatagccct
aacaccgacggtattcacctccagaacacacgtaacgtcgagattcaacactctaacatc
gcttgtggagatgactgtgtatccatccaaaccggctcctccaatgttcatatccaccac
atcaattgtggccctggccatggcatcagcataggtggactagggaaagataagagtgtg
gcatgtgtttctgatatcattgtagaggatatctctatacagaacactcttgccggtgtt
cgaattaagacttggcagggaggattgggggtcgtgaagaacctaacattttcgaacata
caagtaacggacgtgaaggttccaatagtaatcgaccaatattactgcgacaagtccaca
tgcaagaatcagactcgtgcagtgtcgatttccggggtcaaatacaacaacattgtaggt
agcttcacggtgcaaccggtacgtatcgcatgcagcaacaacgtgccatgcatgggcgtg
gatcttatggatataaggctaagaccttctggagggatcagagggttacaaactcatcag
caacaacaagctttgtgttggaactcgtacggcaaaacacaagggcctttggttccttca
agcattggctattgcttgaggaagagtaatattggtgcttattattcacaaaaagttgct
cggtcctatgacaatatttgcccttcataa
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