Camelina sativa (false flax): 104779939
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Entry
104779939 CDS
T05044
Name
(RefSeq) fidgetin-like protein 1
KO
K22766
fidgetin-like protein 1 [EC:5.6.2.-]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104779939
03400 DNA repair and recombination proteins [BR:
csat03400
]
104779939
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
104779939
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104779939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
FIGL1_N
AAA_lid_3
Vps4_C
AAA_5
AAA_22
TIP49
RuvB_N
AAA_16
AAA_14
Mg_chelatase
IstB_IS21
ABC_tran
nSTAND3
AAA_25
AAA_7
Motif
Other DBs
NCBI-GeneID:
104779939
NCBI-ProteinID:
XP_019100099
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Position
4:complement(6145892..6151679)
Genome browser
AA seq
686 aa
AA seq
DB search
RRLCGSVVQIDTEREFEYRFWVFGHFGEEEEEEEERIIMAAGKRPSPFSSPLLRPPPELL
NVKEELETETSCWRKEVDGNLKRLQSLLFGADQFLEKSDFSSAQILGLRLLGFLDSRSVT
AADRDFIGPIRREVASKVDLALEGLVSESDWKAFELAKTAPGPIFGSKGEFDVEKIKQSK
HFGYHLSQYNGNGVKEMEERHDTDKLVSKAPKSMMQAKLTSLYGNSMAKPDNQRRTSMNN
LDRASDECVIVERSHGFGFGTKRTHAETSSLANDGDIKADGAANGFVSAKIKLEMDARQR
RGSTESPLSPQSDKNALGRGYGSRSGGLRRGYRGNFVPPVKSNGNNVGNLTSRIGGKTDD
ALDDSTRTCLEMLCGPDGELPEKLRNLEPRLIEHVSNEIMDGDPNVRWDDIAGLEHAKKC
VTEMVIWPLLRPDIFKGCRSPGKGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTS
KWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGF
DSGSEQILLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIIQNLLKKDGLFTLSDD
DMNIICSLTEGYSGSDMKNLVKDATMGPLREALKRGIDITNLTKDDMRLVTLQDFKDALQ
EVRPSVSQNELGIYENWNNQFGSLSL
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
aggcgtctgtgtgggtcggtggttcagatagatacagagcgcgaatttgaatatcgtttc
tgggtttttggccattttggggaagaagaagaagaagaagaagagaggataataatggcg
gcaggaaagcgtccgtcgccgttttcttctccgctgttgagaccaccaccggagcttctg
aatgtgaaggaggaattagaaacggagacgtcgtgctggaggaaggaggtggacgggaac
ttgaagcgtctccaatcgctgctcttcggcgccgaccagtttctagagaaatctgatttc
tcctccgctcagatccttgggcttcgccttctaggttttctcgattctcgctccgttaca
gccgccgatcgtgatttcatcggtcctatccgccgagaagttgcttctaaggtcgattta
gctttggaaggcctcgtttcagagtcggattggaaagcgtttgagcttgcaaaaacagct
ccaggccctatttttggcagcaaaggtgaatttgatgtggaaaagattaagcagtcaaaa
cactttggttatcatctcagtcaatataacggaaatggtgttaaggagatggaagagcga
cacgatacagataagttggtttccaaagcaccaaagtcaatgatgcaagccaaactgaca
tcattgtatggaaacagcatggctaaaccagataatcaacgcagaacttccatgaacaat
ttagaccgtgcctctgatgaatgtgtcattgttgagagaagtcatggatttggttttgga
acaaagcgcactcatgcagaaaccagcagcctcgcaaatgatggggacataaaggcagat
ggagctgctaatggatttgtatccgccaaaataaaactggaaatggatgcaaggcaaagg
cgaggatcaaccgagtcacctctttctccacagagtgacaaaaatgctttaggtagggga
tatggttcaagatcgggtggattaagacgtggataccgtggtaattttgtccctcctgtt
aaatctaatgggaataatgttggaaacctgacgtctcgtattggtggaaagaccgacgat
gcactggatgactcaaccagaacatgtttggagatgctctgtggccctgatggtgagctt
cccgagaagttgagaaatttggaacctcgtcttatagagcatgtcagcaacgagattatg
gatggagaccccaatgtccgctgggatgatattgctggtctggagcatgctaaaaagtgt
gtaactgagatggtcatttggccattgttgcgtcctgacattttcaaaggttgtcgttca
cctggaaaaggacttcttctctttggcccaccaggaactggtaaaacaatgattggaaaa
gctattgctggagaagcaaaagcaacttttttctatatatcagccagttcattgacaagc
aaatggattggcgaaggtgaaaagttagtgagggccctttttggagtcgcaagttgccgc
cagcctgcagtaatatttgtcgatgaaatagattctctactgtctcagcgtaagtcagat
ggtgaacatgaatcgagtagaagactcaagacacaattcctgattgaaatggaaggtttt
gacagtggcagcgagcaaattctccttataggagcaacaaataggccccaagagctcgat
gaagctgcacgaagacgactaaccaagagactctacattcctcttccttcatctgaagca
agagcatggattatacaaaatctcctaaagaaagatgggttgtttacgctgtcggatgat
gatatgaacatcatatgcagcctaactgaagggtactcgggatcagatatgaagaacctg
gtgaaagatgcaactatgggtccactaagagaagctctcaaacgaggcatagatataact
aacctgacgaaagatgacatgcgtcttgtaactcttcaggattttaaagacgcattgcaa
gaagtaaggccttctgtttctcagaacgaactcggaatctacgaaaattggaacaatcag
tttggtagcttaagcctctaa
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