Camelina sativa (false flax): 104779989
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Entry
104779989 CDS
T05044
Name
(RefSeq) splicing factor 1-like
KO
K13095
splicing factor 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104779989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104779989
Spliceosome [BR:
csat03041
]
Complex A
Other components
Complex A specific factors
104779989
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Motif
Other DBs
NCBI-GeneID:
104779989
NCBI-ProteinID:
XP_010502755
UniProt:
A0ABM0YLA7
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Position
4:6739726..6744812
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AA seq
644 aa
AA seq
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MTSTSGAKISMFGGAKTGFVIPKNKLSGSLIPIFQRGTTNKTLEGADKDSGLHLKLGKRK
TKWGPDLSQDIGVKKARVLAYQKRLDQITQRLASGTLEVETNRESALASQNTNDISIAEQ
LDFEKREAIGEILELNPRYKAPRDYKPLLKEARLPIDVKEHSDFSFLSIIFGSQGDTQKR
LEKETGAKVQIFGTKTGGEKVELSPSHENEIQTPWQTLYFQISSDTYEKVDAAIAVIELL
MSSVSGNTAAGAAPSSSRSEDISTTPALTSEQPTDSSLQPPESQLQQHGSSFPWASNQAP
FHPPLIPSASGHGYSIQEQELPSNSMNLNPLSAQQSYPVPHDTSLPPGSHMPRPPDSFAF
NLSNTPRAYSVNAPPYAGSQIQPIGPHSTMRPSTLFTFQPVHRPTLLPDIVSSNMAQSVR
PLAPNFSPHPVAHQQGTEPPSIPFPTSINLKHLAEYGSGGSMRPMSVSAHITGRPAGLAP
TYPPLDRPINTAPRPFSGDFGFLPQQRNVVSTPHISPRPNSQSAHLPHLSFQAPSVTLNP
RHLEQNFTRLQHFDRQMEQPLSHPSTPFHGNARSSNLQNFGPPSSHQMMPRNFPGAQFPQ
HSTHFPPRPVFHHDNLVPRGQPQIRHRFNSGVHQVYDPFSPGDV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgacttctacaagcggtgcgaagatctcaatgtttggtggtgccaagactggatttgtt
atccctaagaacaaattatctggatcattgatcccgatttttcaacgtggcactactaat
aagaccctagaaggtgctgataaagatagtggacttcacttgaagctggggaagagaaag
actaaatggggtcctgacttgtcacaagacattggagtcaagaaagctcgagttttagct
taccagaaacgcctggatcagattacacagcgactggcttcgggaactcttgaagtggag
actaatagagaatcagctttagcttcacagaacaccaatgatatcagtattgctgaacag
ctggattttgagaagcgcgaagcaatcggggagatactcgagctgaacccgaggtacaag
gctccacgtgattataagccattgctaaaagaagctagattgccgattgatgttaaagaa
cattctgatttcagctttctaagtatcatatttggttcccaaggtgatactcaaaagcgg
ctcgaaaaagagacgggagccaaagtacaaatttttggtactaaaacaggaggagagaag
gttgaactctctccttcacatgaaaatgagatccagacgccctggcaaacgttgtatttt
cagatatcatctgacacttacgaaaaagtggatgcagcaattgctgtaattgagctactt
atgtcttcagtttctggaaacacggcagctggtgctgctccttcatcttccagatctgaa
gatatttcaactactccagccttgacctccgaacagccaactgatagctctttacaacct
cctgaaagccaactccaacagcatggttcttcctttccttgggcttcaaatcaagctcca
tttcatccacctcttataccctctgcttcaggtcatggttatagtatccaggagcaagaa
ctgccatccaattctatgaacctgaatcctctttctgctcaacaatcatatccagttcct
catgacacatcattacctcctggttcccacatgcctcgaccgccagattcgttcgctttt
aacctttccaacacaccaagggcctattctgtgaatgcgcctccatatgctggcagtcag
atacaaccaataggaccacattctactatgaggccatcaaccctatttactttccaacct
gtacatagaccaactttgttgccagacatagtctcaagcaacatggcccaatcagtacgg
cctctggctcctaactttagtccacatccggtagctcatcagcaaggtactgaaccacca
tcaattccctttcccacaagtataaatctgaaacatctagcagaatatggttctggtggt
tctatgcgtcctatgtcagtgtcagcacatattactggcaggcctgctggtcttgctcct
acttatcctcccctagatcgtcccataaatacagctcctagaccattttccggagatttt
ggttttctaccacaacagcgaaacgttgtgtccacaccacatatatctcctagacccaac
tctcaatcagctcatctccctcatctgtcatttcaagccccgtccgtcactctaaaccct
cgacatcttgagcaaaatttcacaagattacagcacttcgacaggcagatggaacaaccc
ttgagccatccatctacgccatttcatggtaacgcgagatcttccaacttgcagaacttt
ggaccaccatcgtctcatcagatgatgccgaggaacttccctggagctcaattcccgcag
cattctactcatttccctccaagaccagtctttcatcatgataacctagtaccgcgtggc
cagccacagattcgccaccggttcaactctggagtccatcaagtgtatgacccgttttca
cccggtgatgtttaa
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