Camelina sativa (false flax): 104780015
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Entry
104780015 CDS
T05044
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104780015
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104780015
03041 Spliceosome [BR:
csat03041
]
104780015
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104780015
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104780015
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104780015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
RRM_PARP14_3
PHM7_cyt
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
104780015
NCBI-ProteinID:
XP_010502777
LinkDB
All DBs
Position
4:complement(7076878..7081878)
Genome browser
AA seq
890 aa
AA seq
DB search
MELSVSSPKQSVLSPPECMSDPEEEHEISEEEDDDRNHKHRRKEEARSQSLEQDSSDQGF
SRPYRKNYRHNENGNSFSEQEKRPFGAGSGQRVQYDNQRMRSNPMFSRDSGPGRGRGNYG
SWAQRDSRFNPVDLSSHMVQVRSMAPNMFGGRGLAGVSAAQSAPWPAFGMIPGVPNGGLD
GFHHLQGSLRPPLNAPLSMGIPRQRCRDFEERGFCLRGDMCPMEHGMNRIVVDDVQSLSQ
FNLPVSVPGAPHLAASSKPVTAQFGGANFMNAKGAHGRINEVGMTVDGLGYGDAYPSAGG
TDFYDPDQPLWNNSTGETSGAISTLNSHGIDENVAPVDDNNQDGAENGCGIRDSRSTSQS
VWGRMRGSNSQTNSKEKTDAVLNSSAGLEDQLKEVSVNISRHGKQNYVGESVTKVVDSSS
TSNDAMNNTRKSTQKAMRTLFVNNVPHESNRRDLILAHFQKFGKVIDIHIPLNSERAFVQ
FSKREEAESALRAPDAVMGNRFIKLWWANRDSIPDNGLSTGNGASMKGRGMTAAGGQNQL
PIAAALKSNHVNSMAKGPAFHTGGAPSSSEQSKPVVATSGPKVMLLQRKKADTLEQLKET
LRKKQEMLEQKRNEYRKKLATLEKQGTVVKGEETDEPDAKRAKVDAASDSGAAIASPKTE
SSTDTRVPIQKPLSTCKLSTETPSPDSKNLKQRPYSYTTSLKAPMANRYKLDNRTTTIKV
VPPLPTGLADVAVLKEHFSYYGEVSKVELEDNVSIGSGKDHETDNENRAACVTFVKRSAA
EKALANAKCWQEHMLQLVWVTRQSSRESNNNSKSKCASNDPKPADEVKTSSTENLENTNV
SEDNDSTLDKQETKESDNDNNKSNHESIEGASEAIVATGTDEDQSEQIRE
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggaactttctgtttcctctccaaagcaaagtgtgttatctccacctgagtgtatgagt
gaccctgaggaggagcatgagatcagcgaggaggaggatgacgatcgcaaccataagcac
cgaaggaaagaagaggcgaggtctcagtccttggaacaagattcttcagatcaggggttc
tcacggccatacaggaaaaattatagacataatgaaaatgggaattcgtttagtgaacaa
gaaaagcggccttttggggcaggatcagggcaacgtgtacagtatgataatcaaagaatg
aggtcgaatccaatgttttcaagggactctggtcctggtagaggtagaggaaactatggt
tcttgggcccagcgtgattccagatttaatcctgttgatctctcatctcatatggttcaa
gtcaggtctatggcccccaatatgtttggaggaaggggactagctggtgtttcagctgct
cagagtgcaccatggcctgcttttggaatgattcctggagttccaaatggtggcttggat
ggtttccatcacttacaaggttccctaagacctcccttaaatgctccactcagcatgggt
attcctcgacagcgatgcagagactttgaggaacgtggtttctgcctcagaggggacatg
tgtccaatggagcatgggatgaatcgtattgttgttgacgatgttcagagtctatcacag
tttaaccttcctgtttcagtccctggtgcacctcatctggcagcttcttccaaaccggtg
actgcacaatttgggggtgctaatttcatgaatgctaaaggagctcatgggaggattaac
gaggttggaatgactgttgatggtttgggttatggggatgcatatcctagtgctggtgga
actgatttttatgatcctgatcaacctttgtggaataacagtactggtgaaacgtcaggt
gcaatatctactctaaattctcatgggattgatgagaatgtagctccagtggatgacaat
aaccaagatggcgctgaaaatggatgtggtattcgagattctagaagcacaagtcaatca
gtttggggaagaatgcgtggttctaatagtcaaacgaattcgaaagagaaaactgatgca
gtattaaattcatcagctggtcttgaagatcaattaaaggaggtctcagttaatatatcc
cgacatggtaaacaaaattatgtcggtgaaagtgtcacaaaagttgttgattcatcaagt
acttcaaatgatgcaatgaacaatacaaggaaatcaactcaaaaggcaatgcggactcta
tttgtgaataatgttccccacgagagcaacagaagggacctcattcttgcccattttcag
aagtttgggaaagttattgatattcacatcccattgaatagtgagcgggcatttgtacaa
ttctcgaaacgtgaagaagctgaatctgctctcagggctcctgatgctgtgatgggtaac
cgctttattaaactttggtgggcaaatagagatagtatacctgataatggcttgtccact
ggcaatggtgcttctatgaagggtcgtggtatgactgctgctggagggcagaaccaactt
ccgattgctgcagctttgaaaagcaaccatgtaaattccatggcaaagggtcctgccttt
cacactggtggagctccgtcctcctctgaacagtctaagcctgtggttgctactagtggt
cccaaggttatgctgcttcagcggaagaaagcagacactcttgagcagttgaaggagaca
cttcggaaaaaacaggaaatgttggagcagaagcgtaacgagtaccgcaaaaaattggcc
acacttgaaaaacaaggtacggttgtcaagggcgaggaaacagatgagccagatgctaag
cgcgctaaagtagacgcagcctctgattccggtgctgcaattgcatcaccaaaaacagag
tcatcaacagatacgagagtgcctatccagaaaccactttccacttgcaagctaagcaca
gaaacaccatctcctgattcaaaaaacctgaagcagagaccttattcgtataccacaagt
ttgaaagctcctatggcaaataggtataagttggataaccgcaccacgaccatcaaagtg
gttcctcctttgccaactgggttagctgatgttgctgtcttaaaggaacatttttcttat
tatggcgaagtctcaaaagtggaactcgaagacaatgtgtccattggtagtggcaaggac
catgaaacagataacgaaaaccgtgcagcttgtgtcacatttgtgaaacgcagcgcagcc
gagaaagcattagctaatgcaaagtgttggcaagaacacatgttgcagcttgtgtgggta
acacgtcaaagcagcagagagagcaataataacagcaaaagcaagtgcgcttctaatgac
ccaaaaccagcagatgaagtcaagacctcctctacagaaaatctagagaatacaaatgtt
tctgaagataacgacagtactttggataaacaagagaccaaagaaagcgacaacgataac
aataaaagtaaccacgagtccatcgaaggagcttctgaggcgattgtagctacaggaact
gatgaagatcagtcagaacaaatccgtgagtga
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