Camelina sativa (false flax): 104780017
Help
Entry
104780017 CDS
T05044
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104780017
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104780017
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Meiosis-specific proteins
Others
104780017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
HHH_5
Cdd1
DNA_pol_lambd_f
IMS_HHH_1
HHH
AAA_22
Motif
Other DBs
NCBI-GeneID:
104780017
NCBI-ProteinID:
XP_010502780
LinkDB
All DBs
Position
4:complement(7094040..7100860)
Genome browser
AA seq
1132 aa
AA seq
DB search
MDTHTLKSVSDLPGNFRSAFSFRYFNSLQSECFPLCFHSDINMVISAPTGSGKTVLFELC
ILRLLSKSISTEGRFLHAKGALKTVYISPSKALVQEKLRDWNHKFNSWGIICLELTGDNE
TYSTRNIQDADIILTTPEKFDAVSRYRVTSGGLGFFSDIALVLIDEVHLLNDPRGAALEA
IVSRIKILSSNHELRSSPLASVRLLAVSATIPNIEDLAEWLKVPTAGIKKFGEEMRPVKL
TTKVFGYAAAKNDFLFEKRLQNYIYDILMQYSKGKSALVFCSTRKGAQEAAQKLAQTAMT
YGYSNPFIKSREQLERLREASPMCSDKQMQSYILQGVGYHNGGLCQKDRSLVEGLFLNGD
IQVICATNTLAHGINLPAHTVVIKSTQHFNKEKGHYMEYDRSTLLQMCGRAGRPPFDDTG
MVIIMTRRETVHLYENLLNGCEVVESQLLPCLIEHLTAEIVQLTISDITRAIEWMKCSYL
YVRMKKNPENYAIKKGIPKDRVEKHLQELCLQKINELSHYQMIWTDTDGFVLKPEEPGRL
MTKYYLKFDTMKYIINAPTGYSLNEALQIVCRAEEISWIQLRRNEKKTLNDVNADREGRL
RFHINDNKGKRKKRIQTREEKLFLLANDWLTGDPSIHDLSMTQDANSICSNGSRIARCMK
EYFIYKKNYKGTLSSTLLAKSLYQKLWDDSPYLLKQLPGIGMVTAKALHSMGVRSFEALA
EADPRRIEIVTGRKYPFGNTIKESLSSLPPKVEIKVEEVDCQKQGISKLAVTLTRLSQPV
QSTKRHYADMIVGSDEENRIHFHEKIRMEDFSSPYSVTILLERPHQQAKATVKADLIFEE
YIGIDLHETLLLKKANNNKINYRSENRLPHYYPPMVDACIVDDDNPATSGPSTRKDKKDE
MPSFKLIDEDSEEEKEPYVTMEEDDCVIINEHTVFDHIREKAKCFPTLKTLNPTSPASRK
SPQKRKSLVENSPELDPLFQYDSVLGLPTRTKDIKQSAQQITSPGYASLADKTGEKERPF
SDETIFNYIRKRSKNSPVVITSRTEDPIAICSQEGSNTEISPYRAYGLLVSPSKKRPGIT
SDAPTEILSFDISMVKGSSTSLEKNKGLCSTLAGKSKESDSFLGFKSVFSFL
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatactcacacgctcaaatctgtctctgatttgcctggaaatttccgttcagctttt
agcttcagatacttcaactcgcttcagagcgagtgctttccactgtgctttcactccgac
atcaacatggttatttcagcgcctacgggaagtggtaaaaccgttctctttgaactgtgt
attttgaggctcctctctaagtccatctctacggaagggaggtttcttcatgctaaagga
gctcttaaaacagtttacatatctccgtccaaggctttagtacaggagaagctgcgtgat
tggaatcataagtttaattcatggggaatcatttgtttggagctgacaggtgataatgaa
acctacagcacaaggaatatacaagacgcagatattatcttgactacacctgagaaattt
gatgcagtgagccgttatcgcgttaccagtggaggcttaggtttcttcagtgatattgcg
cttgtgctcattgatgaagttcacctgctgaatgatccccgtggagctgctcttgaagca
atagtcagtagaataaagattctttctagcaatcatgaactaaggtcaagtcctttagcc
tccgtgcgtcttctggctgtctcagctactatcccaaacattgaggatttagctgaatgg
ctcaaggttcctaccgcaggaattaagaagtttggcgaagaaatgcgacctgttaagttg
acaactaaagtttttggttatgcagctgccaagaatgacttcctctttgaaaagcgcctc
caaaactatatctatgatattttaatgcaatattcaaaaggaaaatctgcattggtattc
tgctcaacacgaaaaggcgctcaagaggctgcacaaaagcttgctcagactgcaatgacc
tatggttactcaaatccatttattaaaagcagagaacagctagaacgattaagggaggct
tcgccaatgtgcagtgacaaacaaatgcaatcttatatcctccaaggcgttggttatcac
aatggtggactttgccaaaaggaccgcagcctcgtagaagggctcttccttaatggagat
atccaagttatctgcgcgaccaacactcttgcccatggaatcaacctgcctgcacataca
gttgtcataaaatcaactcaacatttcaataaggaaaaaggtcactacatggaatatgat
cgttccacactactacagatgtgtggcagggccggtcgacctccatttgatgacacggga
atggttattattatgacaagacgagagacggtccatctatatgagaatctcttaaatgga
tgtgaggttgttgaatcacaattgctgccatgcttaatagagcacctaaccgcagaaata
gttcaactcactatctctgacattacacgggcaattgagtggatgaaatgctcatacctg
tatgtccgaatgaaaaagaatccagagaattatgctattaagaaaggaattcctaaagat
cgagtagagaagcatttgcaagagctttgccttcagaagatcaatgagctttcccactat
cagatgatctggactgacacagacggctttgttttgaaaccagaagagcccggaaggctg
atgacaaagtattatctaaagtttgacacaatgaagtacattattaatgcaccgacgggc
tatagcttgaatgaggcccttcagatagtatgtcgtgctgaagagatatcttggatacag
ctcagacgcaatgaaaagaagacattaaatgatgtaaatgcagatagagaagggaggctc
agattccacatcaacgataataaaggaaagcggaaaaaacgcatccaaaccagagaagag
aaactgtttctgcttgcaaatgattggttgactggggatccttcaatccatgatttatcc
atgactcaggatgctaactctatttgctcgaacggatccagaatagccagatgcatgaaa
gagtactttatttacaaaaagaattataaaggaactcttagctcaactcttctagcaaaa
tcactctatcaaaagctctgggacgacagcccatatttgctgaaacaattaccaggcatt
ggaatggttacagcaaaggcacttcattcgatgggagtcaggtcatttgaagctcttgct
gaagctgatccacgaaggatagagattgttaccggtcgaaaatatcctttcggaaatacc
atcaaggagtctctatcatccctacctcctaaagttgaaatcaaggtcgaggaagttgac
tgccagaagcaagggatatctaaactagcagtcacattgacacggctatcacaacctgtc
caatccacaaaacgccattatgctgacatgattgttggttcagatgaagagaatcgtatc
cactttcatgagaaaataagaatggaagacttctccagtccatatagcgtaaccattctc
ctggaaaggcctcatcaacaagcaaaggcgactgtgaaggctgatctcatcttcgaagaa
tacattggtattgacctccatgaaacacttctactgaagaaggcaaacaacaacaaaata
aattacagaagcgaaaacaggctgcctcactattatcctcctatggtggatgcctgcata
gtagatgatgacaacccagctacatctggaccttcaacccggaaggataagaaagatgag
atgcctagtttcaagctcatagatgaggattcagaagaagagaaagagccctatgtgacg
atggaagaagatgactgtgtcattatcaatgaacatacagtctttgaccacatacgcgaa
aaagccaagtgttttcccacattgaaaactttgaatccaacctctccagcatcaagaaaa
tcacctcagaaaaggaaaagcttagtggagaattctcctgaactcgatcctctatttcag
tatgattctgtgcttggtttacctacaagaactaaggatatcaaacaaagtgcacagcaa
attactagcccaggttatgcaagccttgcagacaaaactggtgaaaaagaaagaccattc
tcggatgaaacaatattcaactacataaggaaaaggtccaagaactctccggtagtcatc
acatcaagaaccgaagatcctatagccatatgttctcaagaaggaagcaacacagagata
agtccgtatagagcatatggattattggttagtccttcaaaaaaaaggccagggatcaca
tctgatgcacctacagaaattctgtcttttgatatctcgatggtcaagggaagcagcaca
agcttagagaagaataagggattatgctcaacacttgcaggtaagtccaaagaatctgat
tcttttcttggattcaaaagcgtcttctcttttctgtga
DBGET
integrated database retrieval system
