Camelina sativa (false flax): 104780162
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Entry
104780162 CDS
T05044
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104780162
03036 Chromosome and associated proteins [BR:
csat03036
]
104780162
Transcription factors [BR:
csat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
104780162
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
104780162
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
HMG_box
Rttp106-like_middle
HMG_box_2
HMG_WDHD1
CDC45
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
104780162
NCBI-ProteinID:
XP_010502944
UniProt:
A0ABM1RM89
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Position
4:9442618..9447257
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AA seq
648 aa
AA seq
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MTDGHSFNNISLSGRGGTNPGLLKINSGGIQWKKQGGGKAVEVDKSDIVGVSWMKVPKTN
NQLGVKTKDGLYYKFIGFRDQDVASLTSFFQSSYGTTPEDKQLSVSGRNWGEVHLNGNTL
TFSVGAKQAFEVSLADVSQTQLQGKNDVILEFHVDDTAGANEKDSLMEIGFHIPNSNTQF
VGDENRPPAQVFNDEIKLMADVTAGAEEAVVTFESIAILTPRGRYSVELHLSFLRLLGQA
NDFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDAVVESELSI
SNDLMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSAQDGFAVKSSLKAED
GVLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGSNMHYFDLLIKLKTDHEHLFRNI
QRNEYHNLYSFISSKGLKIMNLGGAGSADGGVAAVLGDNDDDDAVDPHLERIRNQAADES
DEEDEDFVVGEDDDGGSPTDDSGEDDSDASEGGGGEKEKSIKKELKREASSSSKGLPPKK
KMLVTDEGSSKKKKQKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGD
KWRQMSAEEKEPYEAKAQVDKQRYKDEISDYKNPQPMNVDSGNESDSS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccactccttcaataacatctctctcagcggtcgcggcggaacgaaccct
ggccttcttaagattaactctggaggtattcaatggaagaagcaaggtggtgggaaagct
gtggaagttgacaaatctgatattgtaggtgttagttggatgaaagttccaaagactaat
aatcagttgggggtcaaaaccaaagatgggttatactataagttcattgggtttcgggat
caggatgttgcaagtctgaccagctttttccaaagtagttatgggacaacacctgaagat
aaacagttatctgttagtggtcgaaattggggagaggttcatttgaatgggaatacactt
accttttcggttggtgcaaagcaagcttttgaagtatccttagctgatgtttcgcagact
cagcttcaaggtaaaaatgatgtcatattggagttccacgttgatgatactgctggtgcc
aatgagaaagactcactgatggagataggttttcatattcctaattccaacacccagttt
gttggtgatgaaaaccgtccgcctgctcaagtttttaatgacgaaatcaagttaatggct
gatgttactgctggagctgaggaggcggttgtcaccttcgagagtattgcaatcctcaca
cccaggggtcggtacagtgtggaacttcacctttctttcttacgtttgctaggacaagct
aatgactttaaaatccaatacagtagtgttgtccgcttgttcttgcttcctaagtcaaat
caaccacacacatttgttgttatctctctagacccaccaatccggaaaggtcagacaatg
tacccccacattgtgatgcagtttgagactgacgccgttgtagaaagtgaactgtcaatt
agtaatgatcttatgaatacaaagttcaaggacaagctggagcgatcatataagggtctc
attcatgaagtattcaccaccgtgttgcgttggctgtctggtgcaaagatcactaaacca
gggaagttccgcagtgcccaagatgggtttgcagtgaaatcatctctgaaggcagaagat
ggggttctttatccacttgagaagggctttttctttttacctaaacctccaacgcttata
cttcatgatgagattgactatgtggagtttgaaaggcatgctgctggtggttctaacatg
cattacttcgatcttctcataaaactgaaaactgatcatgaacatctgttccgaaacatt
caaaggaacgagtatcacaatctctattccttcataagctccaaaggtttgaagattatg
aaccttggaggtgccggaagcgcagacggaggtgttgctgctgttcttggggataatgat
gatgatgatgctgttgacccccatcttgagcgtatcagaaaccaagctgctgatgagagc
gatgaggaggacgaagactttgttgtgggtgaggatgacgacggtggttcaccaactgat
gattctggtgaggacgactctgatgctagtgaaggcggcggaggagagaaagagaaatct
atcaaaaaggaactcaagagagaagcttcatcatcttcgaaaggattgcctcctaagaag
aaaatgttagtcacagatgaaggcagtagtaagaagaagaagcagaaaaagaagaaagat
cccaacgcaccaaaaagagcaatgtctggtttcatgttcttctctcaaatggaaagagat
aacataaagaaggaacacccggggatagcatttggagaggtgggaaaggtgcttggagat
aagtggcgtcaaatgtctgctgaggaaaaagagccgtatgaagccaaagcacaagttgac
aagcagcgttacaaggatgagattagtgattacaagaaccctcaaccgatgaacgtggac
tcaggaaacgagtccgacagttcctaa
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