Camelina sativa (false flax): 104780299
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Entry
104780299 CDS
T05044
Name
(RefSeq) protein HIRA-like
KO
K11293
protein HIRA/HIR1
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104780299
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
104780299
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_2nd
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
104780299
NCBI-ProteinID:
XP_010503100
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Position
4:11608964..11619566
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AA seq
1028 aa
AA seq
DB search
MIAEKPVWVKHEGLQIFSIDVQPNGERFATGGGDHKVRIWNMKSVDKDLQNIDTKERLLA
TLRDHFGSVNCVRWAKHSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMT
LRGHSADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGSTFFRRLGWSPCGHFLTTTHGFQKPK
HSAPVLERGEWSVAYDFLGHSAPIIVVKFNNSMFKRTPSSTQDTKRVGWSNGTSKSGGKD
LQSYNVIAIGSQDRTVTVWTTGSARPLFVAKHFFGQSVVDLSWSPDGYSLFACSLDGTVA
MIHFDPKELGVRLTDTELEELKKSRYGDVRGRQANLVECPAQLLLETALTKQIGTKRSAS
DVQQNQVTAKPSASVEITAKRRKSQVDDRDKTADATTGDTLNKASILNRVSSPVNQKVYR
RPDGRKRIIPEAVGVPQQENNIAVNGIGQAQNFLPAITAAPGTGDNGDFPVEISNRDSSV
KEIVCRNPDLKERSRITARATVTESLVIDKVPGTSGNDGVLNVEQSVGIKESSSTDLLIR
VFDWKEGEAAPPVCLEAFPREHALDTVGAVSTSMVKETEIICKKSGETLWSDRIMGRVTV
LAGNPNFWAVGCEDGSLQVYTKCGRRAMPTMMMGSAATFIDCDDSWKLLLVTRKGSLYVW
DLFKRKCVLHDSLSSLVSSDVDLSSTVKGTIKVISVKLSKSGSPLVVLATRHAFLFDTSL
LCWLRVADDCFPASNFSSSWNLGSAPCGELAGLQVDVRKYMARKPGWNRITDDGMQTRAH
LESQLASSLALESPNEYRQCLLAYVRFLTREADESRLREVCESFLGPPTGMAEAASSDKN
LSWDPYVLGVKKRKLLRNDILPAMASNRKVQRLLNEFMDLLSEYEDAETADPPGAKGSTQ
TMNCGGVPSLLDQIGSDPPAMTATTPMTTDNDKPVSLVNSAALEISVSEKPGSENRDRQD
QNSKDSGS
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgattgcggagaaacctgtttgggttaaacatgaagggttacagatattttctattgat
gttcagcctaatggtgaaaggtttgctacaggcggtggtgaccacaaggtccgtatatgg
aacatgaagtctgttgacaaggatttgcaaaacatagatacaaaagagaggcttctcgca
actcttcgtgaccactttggttcagtcaattgtgttaggtgggctaagcacagtaggtac
gtggcatctggttctgatgatcaggtgattcaaattcatgagaggaagcctggttcaggc
accactgagtttggtagtggagaagcccccgatgttgagaactggaaagctgttatgact
ttaaggggccactctgccgatgtggtggatcttaattggtctccagatgattcgatgctt
gctagtgggagtctggacaatacagttcatatatggaatatgcgcactggtatgtgtact
actgttctcaggggtcacttgagcttggtcaaaggcgtaacctgggatccaatagggtca
tttattgctagccaatcggatgacaaaactgtgataatatggcgaacaagcgactggggc
atggctcacagaacagatggtcactgggcaaaatcgcttggatcaacatttttcaggcga
cttggatggtccccttgtggccacttccttactaccactcatgggtttcagaagccgaag
cattctgctcctgtgttagaaagaggggaatggtctgtagcatatgacttcttaggtcat
agtgctccaatcattgttgttaagttcaataattcaatgtttaaaagaaccccctctagt
acccaggatactaaacgagttgggtggagcaatggaacatcaaagtcaggggggaaagat
ttgcagtcatacaatgttattgcaataggaagtcaagaccgtactgtaactgtatggaca
actggaagtgcgcgtcctcttttcgtcgcgaagcatttctttgggcaaagtgttgtcgat
ctatcatggagtcctgatggatattcacttttcgcatgttccttggatggaacagtcgcg
atgattcactttgatccaaaagaactaggcgtcaggcttaccgatactgaactcgaagaa
ttgaagaaaagtcgatatggagatgtcagaggccggcaagcaaacttagttgagtgccca
gcccagttattacttgaaactgccttgacaaagcaaataggtactaagaggtcggcatcg
gatgttcaacaaaatcaggtaaccgcaaaaccatctgctagtgttgagattactgcaaag
aggcgtaagtcgcaagtcgatgatcgggataagacagcagatgctactactggtgacaca
ttaaataaagcatctatcttaaatagggtatctagtcctgtgaatcaaaaagtgtataga
aggcccgacggaagaaagaggatcattcctgaagctgttggagttccccaacaggagaat
aatatcgcggttaatgggattgggcaagctcaaaattttctgcctgctatcactgctgct
cctggtacgggagataatggagattttcctgtggagattagcaatagggattcatctgtg
aaagaaatagtttgcaggaatcctgatcttaaagagcgttcaaggattacagctcgtgct
accgtaactgagagccttgtgattgataaggttcctggaacctctggtaacgatggagtt
ttaaatgttgagcaatccgtaggtataaaagaatcttctagcacagatctgttgataagg
gtgtttgattggaaagaaggggaagctgcaccacctgtttgcttagaagcttttccaagg
gagcatgctttggacactgttggtgcagtaagtacatctatggtcaaggaaactgaaatt
atttgcaaaaaatcaggcgaaactctttggtctgatcggattatggggagagtcactgtt
ttggctggaaatccaaatttttgggctgttggatgcgaagacggaagcctccaagtgtac
actaagtgtggaaggcgtgctatgcctacaatgatgatggggtctgccgcaacatttatt
gattgcgacgatagctggaaactgttgcttgtgacaagaaaaggatctctatatgtatgg
gatctattcaaaagaaaatgcgttctccatgactctctatcttctttggtctcttccgat
gtcgatttatcttccacagtaaaaggaacgataaaggtgatatctgtgaaattatccaaa
tctggttcaccacttgttgttctagccacacgtcatgcattcctcttcgacacgagttta
ttgtgctggctgagagtggctgatgactgcttcccggcctcaaatttcagtagctcctgg
aatttgggctcagctccatgcggcgagcttgctggtttgcaggttgatgtcagaaagtac
atggctagaaagccagggtggaacaggataactgatgacggaatgcaaacacgtgcacat
ttggaatctcaacttgcctcttcccttgcacttgagtcccctaatgaataccgtcagtgt
ctcctcgcctatgtgaggtttttaacaagagaggcagacgagtctagattaagagaagtc
tgcgagagctttcttggacctccaactggtatggctgaagcagcatcttcagacaaaaac
ttgtcttgggatccttatgttctgggggtgaagaagcgtaaacttttgagaaacgatatt
ctccctgcaatggcgtcaaacagaaaagtgcagcgtctactcaatgagtttatggatctt
ttatctgaatacgaagacgcagaaacagcagatcctcctggcgctaagggctcgacacaa
accatgaactgtggtggagtcccatctttactggatcaaataggctctgaccctccagct
atgacagctactactcctatgacaacagacaatgacaagccagtttctctggtaaattca
gcggctttggagataagtgtgtctgagaaaccgggttctgaaaaccgggatagacaagac
cagaactcaaaagactcgggttcttga
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