Camelina sativa (false flax): 104780459
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Entry
104780459 CDS
T05044
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104780459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104780459
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104780459
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
U-box type E3
104780459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Neurochondrin
zf-RING_UBOX
KAP
zf-Nse
HEAT_EZ
MCAfunc
zf-C3HC4_4
Arm_2
RPW8
zf-C3HC4
zf-C3HC4_2
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
104780459
NCBI-ProteinID:
XP_010503261
LinkDB
All DBs
Position
4:complement(13678188..13681321)
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AA seq
657 aa
AA seq
DB search
MEEEKATAAQSLIDVVNEIAAISDYRITVKKLCYNLARRLKLLVPMFEEIRESNEPISEV
TLANLVGLKEAMSSAKDYLKFCSEGSKIYLVMEREQVTSKLLEVCVKLEQSLSQIQYEDL
DISDEVREQVELVLSQFRRAKGRVDVSDDELYEDLQLLCNKSSDVDSYQPALERVAKKLH
LMEIPDLAQESVALHEMVASSGGDVGANIEEMAMILKMIKDFVQTEDDNGEEQKLGVNSR
NNGQTSTVASQKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKT
QQALTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSYRPRKVSSFSSPAEANKIEDLMWR
LAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLN
LSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPP
LVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAI
LAILSSHPEGKAIIGSSDAVPSLVAFIRTGTPRNKENAAAVLVHLCSGDPQHLVEAQKLG
LMGPLIDLAENGTDRGKRKAAQLLERISRLPEQQKEMAQSQTEEAAEPASTTEATDT
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagaaagctactgctgcgcagagcttaatcgatgtagttaacgagattgcg
gcgatttccgattacaggattacggtgaagaagctttgttataatctagcgaggagattg
aagctgcttgttcctatgtttgaggaaattagagaaagcaacgagccgatcagcgaagtt
actttggctaatttggttggtttgaaagaagcgatgagttctgctaaggattatctcaaa
ttctgcagcgaagggagcaagatttatctggtcatggagagggaacaagtgacaagtaaa
ttgctggaggtgtgtgttaagttagaacagtctttgagccagattcagtatgaggatctc
gacatttcggatgaagttagagaacaggttgagctggttctcagccagtttaggcgagcg
aaaggaagagtagatgtatcagatgatgaactatatgaagatcttcagttgctgtgtaat
aaaagtagtgatgtagattcttatcagcctgccctagagcgggttgcaaagaagttacat
cttatggagattcctgacctagctcaagaatcagtggctctgcatgaaatggttgcttcg
agcggtggagacgtcggtgcaaacattgaggagatggcaatgattctgaagatgattaag
gattttgtgcagactgaggatgacaacggcgaggagcagaaactaggggttaactcgaga
aacaatggacaaacttctacggtagcaagtcagaagatacccgtgattcctgatgatttc
cgctgtccgatatcgctggaaatgatgagggatccagttattgtttcatcagggcagacc
tacgaacgcacctgtattgagaagtggatagaaggtggacattcaacatgtccaaaaaca
cagcaggcgctaacaagtacaaccctcacaccaaactatgttctccgtagtctcatagct
cagtggtgcgaggccaacgatattgagcctccaaagccaccaagcagttacagacctaga
aaagtatcgtcattctcgtctccagcagaagcaaacaagatcgaagatctaatgtggaga
ctcgcttacggaaaccccgaggaccaacggtctgcagctggagaaatccgccttcttgca
aaacgaaatgcagacaaccgcgtggccatagctgaagctggagccatacctcttctcgta
ggcctactctcaactcctgattctcgtatccaagaacattcagtaacagctcttttaaac
ctctccatatgtgagaacaacaaaggagccattgtttctgctggagctattcctggtata
gttcaagtactcaagaaaggaagcatggaagccagagagaatgcggcggctacacttttc
agtctatcagtgattgatgaaaacaaagtgactatcggtgccttgggagcgattccccca
ctcgttgtactgcttaatgaaggtacacaaagaggcaagaaagatgccgctactgcactc
tttaacctttgcatataccaaggaaacaaaggaaaagccatacgtgcaggagtgattccc
acgttgaccagactcttgacagagcctggaagcggaatggttgacgaggcgcttgcaatt
ttggccattctctctagccatcccgaagggaaggcaatcataggatcctctgatgcagtc
ccgagtctagttgcgttcattagaactggcacgcctagaaacaaagagaacgcagctgcg
gttctagtccacctctgttctggagacccacaacatcttgtcgaagcacagaaacttggc
cttatgggtccattgatagatttagctgaaaatgggacagatagagggaaacgaaaagca
gcacaattacttgaacgcatcagccgtctccctgaacagcagaaggaaatggcacagtca
caaaccgaagaagctgctgaaccagcatccactacagaagctactgatacttaa
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