Camelina sativa (false flax): 104780613
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Entry
104780613 CDS
T05044
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csat
Camelina sativa (false flax)
Pathway
csat04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
104780613
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csat04040
]
104780613
Ion channels [BR:
csat04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104780613
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Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
UBM
Motif
Other DBs
NCBI-GeneID:
104780613
NCBI-ProteinID:
XP_010503423
UniProt:
A0ABM0YMZ1
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Position
4:complement(15003587..15009690)
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AA seq
700 aa
AA seq
DB search
MSNLHLYTSARFRNFPTAFSLRHHHNDPNNQRRRSIFSELRNKTLDPGGDLITRWNHIFL
ITCLLALFLDPLYFYLPIVQAGTACMSIDIRFGILVTFCRTLADLSFLIHILLKFKTAFV
SKSSRVFGRGELVMDRREIAVRYLKSEFFIDLAASLPLPQMMIWFVIPNAGEFKYAAHQN
HTLSLIVLIQYVPRFVVMLPLNRRIIKATGVAAKTAWSGAAYNLLVSHVLGSVWYVLSIQ
RQHECWRRECTKEMNATHSPSCTLLFLDCGSLQDPGRQAWMRITGVLSNCDARNDDDQHF
QFGMFGDAFTNDVTSSPFFDKYFYCLWWGLRNLSSYGQSLAASTLSSETIFSCFICVAGL
VFFSHLIGNVQNYLQSTTARLDEWRVRRRDTEEWMRHRQLPEELQERVRRFVQYKWLTTR
GVDEEAILRALPLDLRRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVPSLNTKDTYV
TREGDPVNEMLFIIRGQMESFTTDGGRSGFFNSITLRPGDFCGEELLTWALMPVITVNLP
LSTRTVKTLSEVEAFALRAEDLKFVANQFRRLHSKKLQHAFRYYSHQWIAWGTCFIQAAW
RRYVKRKLAMELARQEEGDDYYYDDDGDYEYEEIMPESSNNGDENGSNNQNLSATILASK
FAANTKRGVLGNQRGSSRIDPDDPSLKMPKMFKPEDPGFF
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctccacctctacacctccgcacggttccgcaatttcccgacggcattttcc
ctccgtcatcaccacaacgaccctaacaaccaacgccgtagatccatcttctccgagctc
cgtaacaaaacccttgacccgggcggtgacctaatcacgagatggaaccacatcttcctc
atcacctgccttctcgctctcttcctcgaccctctttacttctatctccccattgtccaa
gccggaaccgcatgtatgtccatcgacatccgtttcggcatccttgtcaccttttgccga
accctagccgatctctctttcctcattcacattctcctcaaattcaaaaccgcctttgtc
tctaaatcatctagagtctttggtcgcggggagctcgtcatggatcgccgtgaaatcgct
gtccgttacctcaaatctgagttcttcatcgacctcgcagcctcgcttcctcttcctcag
atgatgatttggtttgtgataccaaatgctggagaattcaaatacgcagcacatcagaac
cacacgctttccttgatcgtcctgatacagtacgtgcctcgattcgtcgtcatgcttcct
ctcaatcgtcggatcattaaagcaaccggagtggcagccaaaacggcctggtctggtgca
gcctacaatctgcttgtgagccacgttcttggatcggtttggtacgttttatcgatccag
agacagcatgaatgttggagaagagaatgcactaaagagatgaacgcaacgcattcacca
tcttgtactctcttgtttctagactgtggatcgttgcaagatccagggagacaagcttgg
atgcggatcactggggttctgtcaaactgtgatgcacgcaatgacgatgaccagcatttc
cagtttggtatgttcggtgatgcgttcactaatgacgtcacttcttctcctttctttgat
aagtacttctactgtctttggtggggtctccgtaacctcagttcttatggacagagtctt
gcagcgagtacactgagtagtgagactatattcagttgtttcatctgtgttgcgggtctc
gttttcttctctcatctcattggaaacgttcagaactatctgcaatcgacgacggctagg
ttagacgaatggagagtcagaagaagagacacagaggaatggatgcgacataggcaattg
ccagaagagttacaagagcgtgtaaggcgattcgtccaatacaaatggctaacaactcgt
ggagtcgacgaagaagccattctacgggctctaccgttagatcttcgtcgccagatccaa
cgacatctctgtcttgcccttgttcgccgtgtgccgttcttcgcgcagatggatgaccag
ctcttagatgcgatatgtgagcgtctagttccatccttgaacacaaaagacacgtatgtg
acccgcgaaggcgatcctgtaaacgagatgcttttcatcattagaggtcagatggagagt
ttcactacagatggtggacggtcaggattctttaactccatcacgcttagaccaggagat
ttctgcggtgaagagctcttaacctgggctttaatgccagtcattactgttaatctccca
ttgtccacaagaaccgtgaagactctctcagaagtagaagctttcgctctccgagcagag
gacttgaagttcgtagctaaccaattcagacgtctccacagcaagaaactccaacatgct
ttcagatactactcacatcagtggatagcatggggaacttgttttatacaagctgcgtgg
agacgatacgtgaagaggaagttagcaatggagttagcaaggcaagaggaaggagacgat
tactattatgacgatgatggagattatgaatacgaagagatcatgcccgagagtagtaac
aacggtgacgagaacggcagcaataatcagaatttgagtgcgacgatattagcgtctaag
ttcgcggctaatacgaagagaggtgttttagggaaccaaagagggtcttcaagaattgat
cctgatgatccatctttgaagatgcctaaaatgtttaaaccagaggatccaggattcttc
tga
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