KEGG   Camelina sativa (false flax): 104780744
Entry
104780744         CDS       T05044                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csat03009]
    104780744
Ribosome biogenesis [BR:csat03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    104780744
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_EML Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_IP5PC_F Beta-prop_LRRK2 Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_DCAF12 VPS8_N Beta-prop_SCAP WDR54 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR75_2nd DUF4987 PROPPIN DUF465
Other DBs
NCBI-GeneID: 104780744
NCBI-ProteinID: XP_010503568
LinkDB
Position
4:16169172..16171562
AA seq 435 aa
MEISVIASSSVESEIGSWDLKTGNKLLQFKPCASPAHGLTAVGEKFLAASQLRKESASSG
SIFYWSWNKPQVEVKSFPVESIKALTANNEGTYLVGGGTSGDIYLWEVATGKLLKKWHGH
YRSVTCLVFSGDDSLLVSGSQDGTVRVWSLIRLFDDFQRQHGNTLYEHNFNEHTMSITDI
VIDYGGSNALIISSSEDRTCKVWSLSKEKLLKNIIFPSAINSLALDPCGSVFYAGARDSK
IYIGAINATSEYGTQVLGSVSEQSKAVTCLAYCADGNLLISGSESGMVCVWDPKSRRPVR
TFNLGKNPVNNIQVVRKTIVANSNKAQSSWKRRGSLIPPPLEKYERSGEDTMDGIVTIEP
LPYSDVPVYNSFLSADLIDEQVKELQQQGSAATEIEMERLKLEYKRSLQMNDQWQKNYEN
LLQVVMEEEQIGGSN
NT seq 1308 nt   +upstreamnt  +downstreamnt
atggagattagtgtcatcgcgtcatcgtcggtcgaaagtgaaattggaagctgggatctc
aagaccggaaacaaactgcttcaattcaagccgtgtgcttctccggcgcatggtctcacc
gccgtcggcgagaaattcctcgccgcctctcagctccgtaaagaatctgcttcttctggc
tcgattttttactggtcttggaataagcctcaagtcgaagtgaagagcttcccagttgaa
tcaataaaggcacttacagcaaacaatgaaggaacttacttagttggtggtggaacctcg
ggagatatttatctttgggaggttgcgactgggaagttacttaagaagtggcatggtcat
tatcgttcagtaacatgcttggtgttctctggagatgattctttgttagtttcaggatct
caagatggaactgttagagtttggtctcttataaggctttttgatgatttccagaggcag
catgggaacactctttatgaacacaattttaatgagcatacaatgtctataactgacatt
gtcatagactatggaggctccaatgctctgataatttcttcttcagaagatcggacttgc
aaggtttggagcttgtcaaaagagaaattgttgaaaaatatcatttttccttcagccatc
aattcactcgcattggacccttgcgggtctgtgttctatgctggtgccagagacagcaag
atctatatcggtgccattaatgccacaagtgaatatgggacacaagttcttggttcagta
tccgaacagagcaaagctgttacttgcttagcatattgcgcagacggaaaccttttaata
tctggatcagaaagtggtatggtttgtgtttgggatcccaaatcacgtcgccctgttcgg
actttcaaccttggaaaaaatcctgtgaacaatattcaagttgttagaaaaacgatagtt
gctaattccaacaaagcacaatcttcctggaaaagacgtgggtctttgataccaccgcct
ctggaaaaatatgaaagatcaggagaagatactatggatggtattgttaccatcgagccg
ctgccatattctgatgttcctgtttacaattctttcctcagtgctgaccttatcgacgag
caagttaaagaacttcagcaacaaggctctgcagcaacggagatcgaaatggaaagactg
aaacttgaatacaaaagatctttgcagatgaacgatcaatggcagaagaattacgagaat
ttgcttcaggtggttatggaagaagaacaaatcggtggttccaactga

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