Camelina sativa (false flax): 104780967
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Entry
104780967 CDS
T05044
Name
(RefSeq) vacuolar protein sorting-associated protein 35C
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
csat
Camelina sativa (false flax)
Pathway
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104780967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104780967
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
104780967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
GET4
Motif
Other DBs
NCBI-GeneID:
104780967
NCBI-ProteinID:
XP_010503826
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All DBs
Position
4:complement(17880000..17884922)
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AA seq
789 aa
AA seq
DB search
MIAEDDEKWLAAANAAVKQNAFYMQRAIDSNNLKDALKFSAQMLSELRTSKLSPHKYYEL
YMRVFNELGTLEIFFKEETGRGCSIAELYELVQHAGNILPRLYLLCTIGSVYIKSKDVTT
TDILKDLVEMCRAVQHPLRGLFLRSYLAQVTRDKLPSIGSELEGDGDAQMNALEFVLQNF
TEMNKLWVRMQHQGSSREKEKREKERNELRDLVGKNLHVLSQLEGVDLGIYRDTVLPRIL
EQVVNCKDELAQCYLMDCIIQVFPDDFHLQTLDVLLGVCPQLQPSVDIKTVLSGLMERLS
NYAASSVEALPNFLQVEAFSKFNYAIGKVVEAQVDLPAAGSVTLYLFLLKFTLHVYSDRL
DYVDQVLGSCVTQLSATGKLCDDKAAKQIVAFLRAPLEKYNNVVTILKLTNYPRVMEYLD
HETNKTMAIIIVQSVLKNNTHISTADEVDALFELAKGLIKDFDGTIDNEIDEEDFQEEQN
FVARLVHNLYNDDPEEMSKIIFTVRKHILTGGPKRLPLTIPALVFSALKLIRRLRGGDEN
PFGDDASATPKRILQLLSETVEALSDVSAPDLALRLYLQCAQAANDCELETVTYEFFTKA
YLLYEEEISDSKAQVTALRLIIGTLQRMRVLSVENRDILTHKATGYSARLLRKPDQCRAV
YECAHLFWADECENLKDGERVVLCLIRAQRIADAVQNMTNASRGTSSTGSVALYVELLNK
YLYFLEKGNTKVTGDTIKSLAELIRSETKKVESGAESFINSTLRYIEFQRQQDGGMSEKY
EKIKMEWFE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgaggacgatgagaagtggctcgccgccgccaacgccgccgttaagcaaaat
gctttctacatgcagcgcgctattgactccaacaatctcaaagacgctctcaaattttct
gctcagatgctcagcgagcttcgtacttccaagctttctcctcataaatactatgaactc
tatatgcgagtttttaatgaactggggacattggagatattctttaaggaagagacggga
cgtggttgctctattgcagagctgtacgagttagtccagcacgccggtaacattttgcca
agattgtatcttctctgtactataggatctgtatatatcaaatccaaggacgttactact
acggatatacttaaggatcttgttgaaatgtgtcgagctgttcaacatcctttacgtggt
cttttcttgagaagttaccttgctcaagttactagggataagttacccagcattggttct
gagttggaaggagatggtgatgcacaaatgaatgctttagagtttgtgcttcagaatttt
accgagatgaacaaattatgggtccgcatgcaacatcagggatctagtcgggagaaggag
aaacgggagaaagaaaggaatgaactacgtgatcttgttgggaagaaccttcatgtattg
agtcagttggaaggtgttgaccttggaatctacagagatactgttcttcctagaatactg
gagcaggttgtcaactgtaaggatgaacttgctcagtgctacctaatggattgcattatt
caagtatttcctgatgatttccatcttcaaactctcgatgttttattgggtgtttgtcca
caacttcagccgtctgttgatatcaagacggtcctttctggtctaatggaaaggctttca
aactatgctgcatctagtgtggaagcattgcctaatttcctgcaagtagaagccttttca
aagttcaattatgccattgggaaggttgtagaagcacaggtggacttgccagccgcagga
tctgtaacattgtatttgtttcttctgaaatttactctccatgtctattcggatcgtctg
gactatgtggaccaagttttgggatcttgtgttacccaactatctgccacaggaaagctt
tgtgatgacaaggcagcaaaacagatcgtcgcgtttcttagggctccgttggagaagtat
aataatgttgtaactattttgaagcttaccaactatcctcgagtaatggaataccttgac
catgagacaaacaaaacaatggcaattattatagttcagagcgttttgaaaaacaatact
cacatttctactgctgatgaggtcgatgcattgtttgaactggcaaagggtctcatcaag
gattttgacggaacaattgataatgagattgatgaagaagacttccaggaagagcagaac
tttgttgcacggcttgttcacaacctctacaatgatgatccagaagaaatgtctaagatt
attttcacagtaaggaagcacatcctgactggaggacctaaacgtttgcctttaaccata
ccagcccttgtcttttccgctctcaagttaattcggcgactgcgaggtggagatgaaaac
ccatttggagatgatgcatcagcaacaccaaagagaattctacagcttttaagtgagacc
gtggaagctctatctgatgtttccgcacctgatttggcattgcgcctctacttgcaatgt
gctcaggcagcaaatgactgtgagttagaaacggtcacttatgagttcttcacaaaggca
tatcttctgtatgaagaagaaatttcagattcaaaggcacaagtaacagcactacgttta
ataatagggacactccagcggatgcgtgtacttagtgtagagaacagagatattctgact
cacaaggcgacagggtactctgcaagactccttaggaagccagatcagtgtagagctgtt
tatgaatgtgcgcatctcttctgggctgatgagtgcgagaacctgaaagatggagagagg
gttgtgctttgcttgataagggcacaaagaattgcagatgctgttcaaaacatgaccaac
gcatcccgtggtaccagtagcactgggtcggtggctctatatgttgaacttctgaacaag
tatctctacttcttggagaaaggaaacacaaaagtaacaggcgatacaatcaagagctta
gctgaattaatcagaagcgagacgaagaaggttgagtcaggcgcagagtcgttcataaat
agcactctacgttacatcgagtttcagagacagcaagatggtggcatgagtgagaaatac
gagaaaatcaaaatggaatggtttgaatga
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