Camelina sativa (false flax): 104781164
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Entry
104781164 CDS
T05044
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104781164
03015 mRNA surveillance pathway
104781164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104781164
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104781164
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104781164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104781164
NCBI-ProteinID:
XP_010504068
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All DBs
Position
4:18900323..18903151
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AA seq
495 aa
AA seq
DB search
MADTVEKVPTVVESSSSSVEAPVIADKTEPTTTEKKMWGDVEDDDEEEAVSELNSLTIKE
EEKSDSVLEEPEDSNIKAVVSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAI
SLPMIMTPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPKLAEPQALCICPTRELANQNMDV
LQRMGKFTGITAELAVPESTRGGPSAPRRGPVTAHVVIGTPGTLKRWMSFKRLGLNHLKI
LVFDEADHMLATDGFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTVKDPNQL
FVKREDLALDSVKQFKVLCPKEENKIEVIKDQIMELGDIGQTIIFVKTKVSATKVHKALA
EMGYDVTSVHGNMSEVDRDKVVKEFKDCLTQVLIATDVIARGFDQQRVNLVVNYNLPTKF
ETGEPDYEVYLHRVGRAGRFGRKGAVFNLLLDVGCDKEVMEKIEKYFGANVKEIKSWNSE
EEYKSALKEAGLLDE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcggatactgtagagaaagttcccaccgttgttgagtcatcatcttcctccgtggaa
gcacctgttatcgccgataagactgagcccacgacaacggagaagaaaatgtggggcgat
gttgaggatgatgacgaagaggaagcagtgtcggaactcaattctttgaccattaaggaa
gaagagaaaagcgattccgtgcttgaagaacctgaagattcaaacatcaaagcggttgtt
tcgggtgatacaccatatacatcagcaagtaggtttgaggatttgaacttatctcctgag
ttgatgaaaggcttgtacgtggagatgaagttcgaaaagcctagcaagattcaagctatc
agtttgcccatgattatgacgcctcctcacaagcatctgattgcccaggctcataacgga
tctgggaagaccacttgtttcgttcttggaatgttgagtcgggttgatccgaaattggca
gagcctcaggcgctctgcatttgtcccactagagaattagctaatcagaatatggacgtt
cttcagaggatggggaagtttactgggatcactgctgaattggctgtgccagagtcaacg
agaggcggaccatcggctccaagacgaggtcctgttactgctcatgtggtgattggcacc
cctggaacgcttaagaggtggatgtcattcaagagactaggtctaaatcatttgaagatt
ctggtttttgatgaggctgaccatatgcttgctacggatggctttagggatgattccttg
aagataatgaaagacattgggagagttaatcccaatttccaggttctacttttctcggca
acttttaacgaaactgtcaaagattttgtggcgaggacagtcaaggatcccaaccaattg
tttgtcaaaagagaggatctagctttggactcggtaaagcagtttaaagttctttgcccg
aaggaggaaaacaagattgaagtcattaaggatcagattatggagcttggggatattggg
caaaccattatctttgtgaaaacaaaagtgtctgctactaaggtgcacaaagcccttgcg
gaaatgggatatgatgtcaccagtgtccatggtaatatgtctgaagtggacagggataag
gttgttaaggagttcaaagactgccttactcaagtgctaattgctactgatgtcattgca
agaggttttgaccaacagcgggtgaatctggttgtgaattataatcttcccactaaattt
gaaaccggagagccagattatgaggtgtaccttcacagggttgggagagctggtcggttt
ggtcgtaaaggagcggtatttaacctgctgttagatgttgggtgtgataaagaggtgatg
gagaagatcgagaagtattttggagcaaatgttaaggagattaagtcatggaactctgag
gaggagtataagagtgcgttgaaggaagctggcctgctcgacgagtga
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