Camelina sativa (false flax): 104781172
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Entry
104781172 CDS
T05044
Name
(RefSeq) probable pectate lyase 12 isoform X2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104781172
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104781172
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104781172
NCBI-ProteinID:
XP_010504076
UniProt:
A0ABM0YPN8
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Position
4:18954384..18959215
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AA seq
465 aa
AA seq
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MGFAMLNNRTVLLTPHPDPELVAYEVQWRVNASITRRQALDTTDQAGSDPCFTGNPIDDC
WKCNPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSDDDAVNPRPGTLRYGVIQEE
PLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGCITLQYVSNIIIHNIHIHHCY
QSGNTNVRSSPTHYGFRSKSDGDGISVFGSKDIWIDHCSLSRCKDGLIDAVMGSTGITIS
NNFFSHHNEVMLLGHSDHYEPDSGMQVTIAFNHFGEKLIQRMPRCRRGYIHVVNNDFTQW
EMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTKRVETPDGDWKGWNWRSEGDILVNGAFF
VASGEGAEMRYEKAYSVEPKSASFITQITFHSGVLGVGGRNNNLGMWTTTGSEGNGGLDS
YNDYTDEMSGAGSTIRLSFSVLVLSFLLSSISYLVMFTSTQMFML
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgccatgctcaacaacagaactgttcttctcacaccacatcctgacccggaa
ctagtcgcttatgaagttcagtggagagtaaacgcatcgataactagacgtcaagctctt
gacacgacggaccaggccggttcagacccgtgcttcaccggtaacccaatcgatgactgt
tggaaatgtaacccaaactggcccaataaccgacaaggtctagcagattgtggaatcggg
ttcggacagtacgccttgggtggcaaaggtggtcagttctactttgtcactgattcttcc
gacgacgatgccgtcaaccctagaccgggcactctcagatacggagtgatacaagaagag
ccattgtggatagtgttcccaagcaacatgatgattaagctaaagcaagagctaatattc
aatagttacaagacacttgatgggagaggagctaatgttcacattgttggtggtggctgc
atcactcttcaatatgtctccaatatcatcatccataacattcatatccaccattgttac
caatccgggaatactaacgtgcggtcaagtccaacgcactatgggttcagatccaaatcg
gacggtgatggtatctcagtcttcggttcaaaggacatatggatcgaccattgttctcta
tcgagatgtaaggacggtttaatagatgcggtgatgggttccactggaattactatatcg
aacaacttcttctctcaccataatgaagtcatgcttctcggtcacagcgaccactacgaa
ccagacagtggcatgcaggtaacaattgcgtttaatcactttggagaaaaattgatacaa
aggatgcctaggtgtcgtcgtggatatatccacgttgttaataacgatttcactcaatgg
gaaatgtatgcgattggcggtagcggtaacccgactattaacagtcaaggtaaccgctac
accgccccgaccaacccattcgccaaagaggtgactaagagagtggaaacaccggatggc
gattggaaagggtggaactggagatcagagggggacattttggtgaatggagccttcttt
gtggcatccggtgaaggtgcggagatgaggtatgagaaggcgtatagcgtcgagcctaaa
tccgcctcattcatcacccaaatcacatttcactcgggagttcttggcgtcggcggcagg
aataacaatcttgggatgtggactactacgggatcagaaggtaatggcggtttagattct
tataatgactataccgatgaaatgtctggtgccggttcaacgatccggttatctttctca
gttcttgtgttatcattcttgcttagttcaatatcatatcttgtcatgttcacttcaacc
caaatgtttatgttgtaa
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