Camelina sativa (false flax): 104781251
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Entry
104781251 CDS
T05044
Name
(RefSeq) RNA polymerase sigma factor sigC isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104781251
Transcription machinery [BR:
csat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
104781251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
104781251
NCBI-ProteinID:
XP_010504169
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Position
4:complement(19324329..19327414)
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AA seq
582 aa
AA seq
DB search
MASFNSFPIPKQIVGSSSSSSSSRRRILVRSTMASTNTMLVFVPPHPLIKHWLSLLRCEQ
TSFPIFVFLNDFSLLLDASVRIPMNSVFPTRWSFLSSLKEESRIIYQKDPFKACGCASAT
PYTTSNNLYVEIKDSKENIGEQMSSAEKSYSSRSMLQYNLLAKNLLALEETFVALDSLRM
ERDIMLQMAKLGAAEFFKTCLSRSRCSSITSCLSDTTELVGTAPNQQVFVSSRRKLKKIA
RRSSVTGENGVDQGSLPTGLRTIWNNIDAPRVRRPPIYRKKRERISRNEAEMSTGVKIVA
DMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLHYGWYCRDELLKSTRSLVLFLAR
NYRGLGIAHEDLVQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSMMVSRHARGVHI
PASIIRTINQIQKARKTLKTSHGIKYPADEEISKLTSLSVKKIRAANQCLRVVGSIEKKV
GDCFSTKFLEFTPDRTMESPEEAVMRQSARRDLHDLLEGLEPREKQVMVLRYGLQDYRPK
SLEEIGKLLRVSKEWIRKIERRAMAKLRDQPNAEDLRYYLKQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccttcaattcattccccattcccaaacagattgttggttcttcttcgtcttcc
tcttcttctcggcgacgtatcttggtgcgatcgactatggcgtcgaccaatactatgctg
gtcttcgtacctccacatcctttgattaaacattggctctcccttttaagatgtgagcaa
acttctttccctatttttgtttttttaaatgacttctctctgttacttgatgcttcagtt
agaattccaatgaattctgtgtttccaacgagatggtcgtttctatcctcactcaaagag
gaaagcagaattatctatcagaaagatccttttaaagcatgtggctgcgcatctgcaact
ccttacactacatcaaataatctctatgttgagatcaaagattcaaaggaaaatattgga
gaacaaatgtcttctgcagaaaaatcatattcttctcgtagcatgttgcaatacaattta
ctagcaaagaaccttttagcactagaggaaacttttgttgccttggactctttgagaatg
gaaagagatattatgttgcaaatggccaagttaggggctgctgagtttttcaaaacctgt
ctatctaggtctcgttgttcttcaatcacctcatgcttatctgacacaaccgagttggtg
ggtacagcaccgaatcagcaagtctttgtatcatccagaaggaaattgaaaaagatagct
agaaggtcgagtgtgacaggtgagaatggtgttgatcagggttctttgccaaccgggtta
agaaccatatggaacaatatcgatgcccctagagtgagaagaccaccgatatatagaaag
aaaagagagaggatctctagaaacgaggctgagatgtcaacaggagtcaagatagtggcg
gatatggagagaatcagaacgcaactggaggaagaaagtggtaaggtagcgagtttgagt
tgttgggcagaagcagctgggatgaacgagaaactcctgatgcgcaatctacattacggt
tggtactgtagagatgaactgttgaaaagcacccggtctttggttctctttcttgcaaga
aattaccgtggactgggaatcgcccacgaagatttagttcaggcagggtatgtgggggtg
ttacaaggagcagagaggtttgatcacacaaggggttacaagttttcaacatacgtgcag
tattggataagaaaatcaatgtccatgatggtgtcacggcacgcaagaggcgtccatatt
cctgcatcaataatccgaactatcaatcagatccaaaaggctcgtaagaccttgaaaacg
agccatgggataaaatatccggctgatgaggagatttcgaaactaacaagcctgtcggtg
aagaagattcgagcagctaaccaatgcctaagagtggtcggttctatcgaaaagaaagtc
ggggattgcttttctacaaaattcctggaatttacaccggacaggacgatggagagtcca
gaggaggctgtgatgaggcagagcgcgaggagagacttacatgatcttctagaagggcta
gagccaagagagaagcaagtgatggttctacgttatggtcttcaagactacaggcccaag
tcccttgaagagattgggaagcttcttagagttagcaaagaatggattcggaagatcgaa
cggagggcaatggctaaactcagggaccaacccaacgcggaagacctcagatattatttg
aagcagtaa
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integrated database retrieval system