Camelina sativa (false flax): 104781362
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Entry
104781362 CDS
T05044
Name
(RefSeq) probable pectate lyase 13
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104781362
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104781362
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104781362
NCBI-ProteinID:
XP_010504322
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Position
4:19952812..19956244
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AA seq
501 aa
AA seq
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MLLPNFTNTIFILCLFFSTLLAATKPLNLTLPHQHPSPDSVALHVIRSVNASMARRQLGS
SSSSSSSSSSSSSCRTGNPIDDCWKCSDSDWSSNRQRLADCSIGFGHGTLGGKNGKIYVV
TDSSDNNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIRLKQELIISSYKTLDGRGSAVHIT
GNGCLTLQYVQHIIIHNLHIYDCKPSAGFEKRGRSDGDGISIFGSQKIWVDHCSMSHCTD
GLIDAVMGSTAITISNNYFTHHDEVMLLGHDDNYGPDTGMQVTIAFNHFGQGLVQRMPRC
RRGYIHVVNNDFTEWKMYAIGGSGNPTINSQGNRYAAPSDPSAKEVTKRVDSKDDGEWAN
WNWRSEGDLMENGAFFVASGEGMSSMYSKASSVDPKAASLVDQLTRNAGVFGGPRDDQGQ
SGNSYSPFGGEGSSSGGGGIGDMSGMGGTTRGSSSSSSGDDSNFFGMIFGSHAPPPQPRL
TLLFSLLMISVLSLSSTLLLL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcccgaacttcacaaacaccattttcattctctgcctcttcttctccacactc
ctcgccgctactaaacccctaaatctcactctccctcaccaacatccttcccctgactcc
gtcgctctccatgtcatcaggagtgtcaatgcatctatggcaagaagacaactaggctcc
tcctcttcctcatcctcatcctcatcctcctcctcctcttgccgtaccggaaacccaatc
gacgattgctggaagtgcagcgactcagactggtcatcaaaccgtcaaagactcgccgac
tgttcaatcggcttcggacacggcacactcggaggcaaaaacggcaagatctacgtcgtc
accgactcctccgacaacaacccaacaaacccaactccaggaacactccgttacggcgtt
atccaagaagagcccctctggatcgtcttctcctcgaacatgctcatcagattgaaacaa
gaactcatcatcagcagctacaagaccttagacggccgtggatcagcagtacacatcaca
ggaaacggatgcttaactctacaatacgttcaacacatcatcatccacaatctccacatc
tacgactgtaaaccatcagctggattcgagaaacgaggtagatccgacggagacgggatc
tcgatcttcggatctcagaagatctgggttgaccattgctccatgagccattgcaccgac
gggcttatagatgcggtgatgggttcaacagctataacgatatctaacaactacttcacg
caccacgacgaggtgatgttgttgggtcatgacgataactacgggcctgatacggggatg
caggtgacgatagcgtttaatcatttcggacaagggcttgttcagaggatgcctagatgt
cgtagaggttatattcatgttgtgaataatgatttcactgagtggaagatgtatgctatt
ggtggtagtggtaatccaaccattaacagccaagggaatcgttacgctgctccttctgat
cctagcgctaaagaggtgacgaagagagtggactcgaaagacgatggagaatgggcgaat
tggaattggaggtcagaaggagatctgatggagaatggagctttctttgtggcatctggt
gaaggaatgagctcaatgtactctaaagcttctagtgtggaccctaaagctgcttctctc
gtagaccagctcactcgaaacgctggcgtttttggcggtcccagggatgatcaaggtcag
agtggcaattcttattcaccgtttggaggtgaaggcagcagcagcggcggtggagggatt
ggtgatatgagtggtatgggcggtacaacaagaggaagtagtagcagcagcagcggcgac
gacagcaatttctttgggatgatatttggaagccatgcaccgccgccgcagccgcgttta
acgttattgttttctttgttaatgatttcggttttgtcattatcatcaactctattattg
ttgtag
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