Camelina sativa (false flax): 104781587
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Entry
104781587 CDS
T05044
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104781587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104781587
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104781587
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_THOC3
ANAPC4_WD40
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
Tricorn_2nd
WD40_MABP1-WDR62_1st
Sod_Fe_N
DUF7397
Motif
Other DBs
NCBI-GeneID:
104781587
NCBI-ProteinID:
XP_010504602
UniProt:
A0ABM0YQY3
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All DBs
Position
4:21170534..21174049
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AA seq
448 aa
AA seq
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MASFPQPGSVTVCEINRDLITGQNLSDDRAQETYGKLLGMVFSPVSFDSTPIPLQANEGQ
ENGDREESVDRKGLVATLQTMVTDSLKQILQPTDVTLLSEIDLQGVSWHQGKHILAFISG
ANQVTIRDYEDKDEKEPCILTSDSQRSVKALEWRPNGGKSLSVACRGGICIWAASYPGNM
ALVRSGGSALRGSLSRGSGTRWILVDSLRGHNDEQISALSWSPCGRYLASASYDSSSFTI
WDVSQGAGTPIRRGLGGISMLKWSPTGDYFFAARFDGTFCLWETNTWTSEPWSLSTGSGS
VTGAIWDPEGRFILISFSKSSTLGSVHFSSKPPSLDAHLLPVELPEITSQTGCEGIKNIA
WDASGERLAVSYKGGDDNYKGLIAIYDTRRTPIVSASLVGFIRGPGENPKALSFSFHDKF
KQGPLLSVCWSTGFCCTYPLIFRSHVLP
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttttcctcaacccggttccgtcaccgtctgcgagatcaacagagacttgatt
acgggtcagaacttgtctgatgatcgagcccaagagacttatggaaaacttctcggaatg
gtgtttagccctgtttcgttcgactctacacctatccctctgcaggcaaatgaaggacaa
gagaatggagatagagaagaaagtgttgatagaaaaggacttgtggcaactctgcaaacc
atggttacagactctcttaaacagattttacaacccaccgatgtaactcttctctcagag
attgatcttcaaggagtgagttggcatcaggggaagcatattcttgcctttatatccggt
gcaaatcaagttacaattcgtgattatgaggacaaagatgagaaagaaccttgcattttg
acaagtgattcccagagaagtgttaaagcccttgagtggagaccaaatggtggaaaatcg
ctatccgtggcctgtcggggaggaatatgcatatgggctgcttcctatccaggtaatatg
gcattggttagatccggtggttctgcgttgaggggaagtctatctcgaggatctggaact
cgctggattttggtggactctcttcggggtcataatgatgagcaaattagtgctctctca
tggagcccctgtggaagatatttagcatcagcctcatatgacagctcatctttcaccata
tgggatgtttctcaaggagcggggacacctattcgacggggactaggcggcatatcaatg
ctcaaatggtcacctacaggagactatttctttgcagcaagatttgatgggacgttttgc
ctttgggaaacaaacacatggacatctgagccctggtctttgtcaactggatctggatct
gtcacgggtgcaatatgggatcctgaaggacggtttatcttgatttcgttttcgaaatct
tcaacactgggctcagttcatttctcatccaagccaccatccttggatgcccatctttta
ccggttgaattgccagagattacttcccagactggctgtgagggaatcaaaaatatagcg
tgggatgcatctggggaacgattggctgtgtcgtataaaggaggcgatgacaattacaaa
ggattgattgccatctacgacactcgaaggacaccaattgtatcagcatcactagtcggt
ttcatcagaggacctggagaaaacccgaaagctctctccttttcattccatgacaagttc
aagcaaggtccactcctttccgtgtgttggagcaccgggttctgttgcacctatcctctc
atcttccgctcacatgttcttccttag
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