Camelina sativa (false flax): 104781658
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Entry
104781658 CDS
T05044
Name
(RefSeq) polygalacturonase ADPG1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104781658
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104781658
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
104781658
NCBI-ProteinID:
XP_010504680
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Position
4:complement(21525244..21527900)
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AA seq
432 aa
AA seq
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MARCCGLLTIFICVLLMLSLCQANLSSYVDDGYGHEDGSFESDSLLKLNNDDVLTLKSSG
ETTSASSTVSVASFGAKGDGKTDDTQAFEKAWKKACSTNGVTNFLVPKGKSYLLTSTQFK
GPCKSLRNFQILGSLSASTKRSDYKDKYHWLILEDVNNLSIDGGSTGVINGNGKIWWQNS
CKIDKSKPCTTAPTALTLYNLRNLNMKNLRVRDAQQIQVSIENCNNVDVNNVVVSAPGDS
PNTDGIHITNTKNIRVSKSDIGTGDDCISIEDGTQNLQISDLTCGPGHGISIGSLGDDNS
KAYVSGIYVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIQMKNVKNPIIIDQNYCDKD
KCEDQESAVQVKNVVYKNISGTSATDVAITFNCSEKYPCQGIVLENVNIKGGNASCKNAN
VKNQGTVSPKCS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcccgttgttgcggactcctaactattttcatctgcgttcttttgatgctctcgctg
tgccaagctaatttgagtagctacgttgatgatggatatggtcatgaagatggaagcttc
gaatccgacagcttacttaagctcaacaacgatgatgttcttaccttgaaaagctccggt
gaaaccacttcagcatcctcaacagttagtgttgccagttttggagccaaaggcgatgga
aaaaccgatgatactcaggccttcgagaaagcatggaagaaagcatgttcaacaaatgga
gttaccaatttcttggttcctaaagggaagagttacctccttacctctactcaattcaaa
ggcccatgcaaatcactacgtaactttcagatcttaggcagtctatcagcatctacaaaa
cgatcggattacaaagacaaataccattggcttatcttagaggacgttaacaatctatca
atcgatggtgggtcgactggggttattaacggcaacggaaaaatctggtggcaaaactca
tgcaaaatagataaatctaagccatgcacaacagcgccaacggctcttactttatacaac
ttaaggaatctaaatatgaagaatttgagggtgagagatgcgcagcagattcaagtttcg
attgagaattgcaacaatgttgacgtcaataatgttgtcgtctctgctcccggcgatagt
cccaacaccgatggtatccatattaccaataccaaaaatattcgagtttccaaatcggat
attggaacaggtgatgattgtatatccattgaagatggaacacaaaatcttcaaatcagt
gatttaacttgcggccccggtcacggaatcagtattgggagcttgggggacgacaactca
aaagcttatgtttcgggaatttatgtggatggtgctaagttctctgagagtgataatgga
gttcggatcaagacttatcagggaggatcaggaactgccaagaacattaaatttcaaaac
attcaaatgaaaaatgtcaagaatccgatcataatcgaccagaactactgcgacaaggac
aaatgcgaagaccaagaatccgccgtgcaagtgaaaaacgttgtgtacaagaacatatcc
ggtacgagcgcgacggatgtggcgataacgttcaattgcagtgagaagtatccatgccaa
ggcattgtgcttgagaacgtaaacattaaaggaggaaacgcttcttgcaaaaatgccaac
gttaaaaatcaaggcaccgtttctcctaaatgctcttaa
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