Camelina sativa (false flax): 104782426
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Entry
104782426 CDS
T05044
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104782426
04121 Ubiquitin system [BR:
csat04121
]
104782426
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104782426
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
104782426
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104782426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
zf-HC5HC2H
zf-HC5HC2H_2
Zn_ribbon_NOB1
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
104782426
NCBI-ProteinID:
XP_010505651
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All DBs
Position
4:complement(25563631..25565926)
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AA seq
403 aa
AA seq
DB search
MASGSYWCYSCSRFVWVSDSISCPDCDGGFLEHIQESLDFTPSDSFHRVTTTAQHRSPTR
FPLPSSSSSSMHASTADNSPTTPTTVTRTRSSNRSPNPVIVLRGSGGGAPSSDVSEGLDR
SAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNNRSCDHPPASKS
AIEALPVIEIDPNHLQSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSC
PVCRHELPPAEDTSDGNTGPGGALTVTASAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWR
GGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGSSRERGSGFAGRIMRLFGCFSG
SSGSIAASASSGSGSRIRVTRRSSFSLFSTSSSSSSRRRNWLA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggatcttactggtgttacagctgtagccgattcgtttgggtttccgattca
atctcttgccctgattgcgacggtggtttcctcgaacacatccaagaatctctcgatttc
actccttccgattcattccaccgcgtcaccaccactgctcagcatcgcagccctactcgt
ttccctctcccttcttcctcttcttcatctatgcacgcttcaaccgccgacaacagtccc
accactcccacaaccgtgactcgtactcggagcagcaaccgatctcctaatcctgttatc
gtcctccgtggatctggtggtggtgctccttcttctgatgtctccgaaggtttagatcga
tctgcttttcagatgtattacgatgacggtactgattctggtcttagacctttaccacct
agtatgactgagtttttgctaggttctggattcgatcggttgttagatcagatctctcag
atcgagcttaacaccaatcgtaacaatcgttcttgtgaccatcctcccgcttctaaatcg
gcgatcgaagctttgcctgtgatcgaaatcgatcctaatcatctccagtctgattctcaa
tctcactgcgctgtttgtaaagagaattttgttttgaaatcctcggctcgtgagatgcct
tgtaaccacatctatcatcctgattgtatccttccttggcttgcgattcgaaactcttgt
cccgtttgccgtcacgagcttcccccggcggaggatactagtgatggaaacaccggaccc
ggtggtgctttgacggttaccgcttcggcggaggaagaggaagactccgcggcggggctg
acgatttggaggttaccaggtggaggattcgctgttgggagaatccctggtggttggaga
ggtggagatagaatgatgccggtggtttacacggaggttgacggtggtagactaggtgac
gagagacttccgagaagagtagcttggggttcgagaagaggaggaagagatggaagtagt
agagagagaggcagcgggtttgcgggtcggatcatgaggctttttggatgttttagtggg
tcatctggatccattgctgcttcagcatcgtccgggtccgggtccaggattcgtgttacc
cgtaggtcgtcgttttctctgtttagtacatcgtcgtcttcttcgtcaaggagacgaaat
tggctagcctga
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