Camelina sativa (false flax): 104782567
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Entry
104782567 CDS
T05044
Name
(RefSeq) autophagy-related protein 18c-like isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104782567
Membrane trafficking [BR:
csat04131
]
Autophagy
Other autophagy associated proteins
Others
104782567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
BCAS3_WD40
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_IFT140_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
104782567
NCBI-ProteinID:
XP_010505834
LinkDB
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Position
4:26296926..26300047
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AA seq
419 aa
AA seq
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MWFSVVKDRIRMSSTVSNPQGVLQPGGYGGHDSRSNSTSGSFVGPESESNENEEAELVSV
SWNQDSSCFAAGTSHGFRIYNCEPFKETFRRELKNGGFKIVEMLFRSNILALVGGGPNSQ
YPSNKVLIWDDHQSRCISEFAFRSEIRSVKLRRDRIVVVLEHKIYVYNFMDLRLLHQIET
QANPRGLCCLSHHSNTSVLACPGLHRGEIRVEHFGLNMVQIINAHDSSIACMTLTLDGLL
LATASTKGTLIRIFNTMDGTRLQEVRRGVDRADIYSIALSPNVQWLAVSSVKGTVHIFSL
RVRVVGEDSHSTENAALLTQHTYSNSLQGLVSPTTGTNPGSSLSFMRGVLPKYFSSEWSY
AQFHVSEVTQFFAAFGSHNTVAIIGMDGSFYRCSFDPVNGGEMGQLEYFHFLKTDNRTQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttagtgttgtaaaggatcgaataagaatgagttcaactgtttcaaatccccaa
ggggttctgcaaccgggtggttatggtggtcatgactccagaagtaacagcacttctggc
tcttttgtgggtccggaatcagaatctaatgaaaacgaagaagcggagttggtttctgtg
tcttggaaccaggattcaagttgttttgctgctggaacaagtcatggttttcgtatttat
aactgtgagcctttcaaggaaactttcaggcgtgagctgaagaatggcgggtttaaaatt
gtggagatgcttttccgaagcaatatattggcgcttgttggtggtggacctaactctcag
tacccttcaaacaaagtactgatttgggatgatcatcagagccgctgcatcagtgaattt
gcttttcggtctgagattcgttcggtgaaacttagaagggatcggatcgttgttgttctt
gaacataagatatatgtttacaattttatggacctaagacttcttcatcagattgaaact
caagcaaatccaagaggtttatgttgcctttctcatcattcaaatacatctgtgctggct
tgccctggtcttcatcgaggagagattcgagttgaacattttgggcttaacatggtacaa
atcataaatgctcatgattccagtattgcgtgcatgaccttgacattggatggtttgttg
ctcgctactgccagtacaaagggcacgctgattagaatcttcaataccatggacggaact
cgtttgcaagaggtaagaagaggagtggacagggcagatatctatagcattgcactttca
ccaaacgtgcagtggctggcagtatcaagcgtcaaggggactgttcacattttctctctt
agagttagggtagttggggaggattctcattccactgaaaatgctgctctcctgacacaa
catacgtattctaattctctgcaaggccttgtttctccaaccactggtaccaatcctggt
tcgtcattatcttttatgagaggtgttctgccaaagtatttcagctcggaatggtcatat
gcacagttccatgtatcagaagtcacacagttctttgcagcgtttggcagtcacaacacg
gttgctattatcgggatggatggaagtttctacagatgcagctttgatccggtgaacggg
ggagagatgggacagctagagtatttccactttctaaagacggataaccgcacccaataa
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