Camelina sativa (false flax): 104782918
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Entry
104782918 CDS
T05044
Name
(RefSeq) sm-like protein LSM36B
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104782918
09123 Folding, sorting and degradation
03018 RNA degradation
104782918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104782918
03041 Spliceosome [BR:
csat03041
]
104782918
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104782918
mRNA degradation factors
5'-3' decay
Lsm complex
104782918
Spliceosome [BR:
csat03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104782918
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
104782918
NCBI-ProteinID:
XP_010506282
UniProt:
A0ABM0ZMT0
LinkDB
All DBs
Position
4
Genome browser
AA seq
91 aa
AA seq
DB search
MSGIGEKASGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVN
GQLKNKYGDAFIRGNNVLYISTTQGNLADGA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaattggagagaaagcttctggaacaactaagacacctgctgatttcttgaag
tcgatccgtggtagaccagttgttgtcaagctcaactctggtgttgattaccgaggcatt
cttacttgtcttgatgggtatatgaacatagctatggagcaaacagaagagtacgtaaat
ggccagctaaagaacaaatatggcgatgcttttatccgtggaaacaacgttctttacatc
agcacaacgcaagggaatttggcagatggagcctag
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