Camelina sativa (false flax): 104782927
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Entry
104782927 CDS
T05044
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104782927
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104782927
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Pectate_lyase_4
NosD
LSM_int_assoc
Motif
Other DBs
NCBI-GeneID:
104782927
NCBI-ProteinID:
XP_019099886
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Position
4:27937189..27938912
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AA seq
394 aa
AA seq
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MANNISFPCSIILLSIIFFFFINSSHAMPSFNVQRYGARGDGRTDATNSFLTAWSLACRS
RARAMVYIPRGTYMVRNLVFWGPCKNVITFKIDGTLVAPANYWSIGNSGYWILFAKVNRI
SVYGGTIDARGAGYWSCRKKGGHCPQGARSISFSWCSNVLLSGLTSFNSQNMHVTVHHSS
NVRIQNVRIRAPSGSPNTDGIHIQSSSGVAITGGTIATGDDCIALSQGSRNIWIERVNCG
PGHGISIGSLGDYANEEGVQNVTVTSSVFTKTQNGVRIKTWARPSRGFVRNVVFRNLIMR
NVGNPVIIDQNYCPNGRGCPRQSSGVKISGVTFANIKGTSTTPIAMKLDCSGSNHCTGLR
LQDIKLTYMRRSSASYCRNVHGRASGVMVPRNCM
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggccaataacatctcttttccttgttccataatattattatctatcatcttcttcttt
tttatcaactcatcacacgcaatgccatcgtttaacgtacaaagatacggagctagaggt
gatggaagaacagatgcgaccaactcctttttgacagcttggtcattagcctgccgctca
cgggctagggccatggtctacattccccgtggaacatatatggtcagaaacctagtcttt
tggggtccttgcaagaacgttataactttcaaaatcgatggaacactcgtggctccggca
aactactggagtataggtaattccggttattggattctctttgctaaagtaaaccggatc
tcggtttatggtggcaccattgatgctagaggagctggttattggtcatgtagaaagaaa
ggtggacattgtcctcaaggtgcaaggtctatatcgttcagctggtgcagtaacgttcta
ctaagtggtctaacgtcgtttaatagccaaaatatgcacgtcacggttcatcattcctct
aatgttcggattcaaaacgtaagaattagagctccaagtggaagccctaacaccgacggt
attcacatccaatcttcttctggagtcgctattactggcggaaccattgcgaccggtgat
gactgtattgctcttagtcaaggatctaggaacatttggatcgaacgggtgaattgtgga
cctggacatggcatcagcattgggagtcttggggattacgctaatgaggaaggtgtgcag
aatgtaaccgtaacgagctctgttttcaccaagacgcagaacggagtaagaataaagact
tgggctaggccgagcagagggtttgtgaggaatgttgtatttcggaatttgataatgagg
aatgttggtaatccggtgattatcgatcagaactattgtcctaatggaagaggatgtcct
cgtcagagctccggtgtgaagataagtggagtgacttttgcaaacataaaaggaacatca
acaacaccaatagctatgaaactggattgtagtggaagcaatcattgcaccgggcttagg
ttacaagacattaagctcacttacatgagaagatcatcagcttcttattgtaggaatgtc
catggacgagcctctggagttatggttccaaggaattgcatgtga
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