Camelina sativa (false flax): 104782966
Help
Entry
104782966 CDS
T05044
Name
(RefSeq) actin-interacting protein 1-2 isoform X1
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csat04990
]
104782966
Domain-containing proteins not elsewhere classified [BR:
csat04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
104782966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
KNTC1_N
SipA_2nd
Motif
Other DBs
NCBI-GeneID:
104782966
NCBI-ProteinID:
XP_010506341
LinkDB
All DBs
Position
1:8022621..8026193
Genome browser
AA seq
609 aa
AA seq
DB search
MELSETYACVPSTERGRGILISGDSKSDTILYTNGRSVVMLDLNNPLKVSIYGEHAYPAT
VARYSPNGEWIASGDVSGTVRIWGAYNDHVLKKEFKVLAGRIDDLQWSADGLRIVASGDG
KGKSLVRAFIWDSGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEGPPFKFK
LSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEKLGELSPDDGHKGSIYAVSW
SPDGKQVLTVSADKSAKVWDMSESGSGTLNTTLNCPGSSGGVDDMLVGCLWQNDHIVTVS
LGGTISIFSASDLDKSPFQFSGHMKNVSSLAVLKGNTDYILSGSYDGLICKWVLGRGFSG
KLQRTQNTQIKCFAAHEEEIVTSGYDNMISRISYKDDQCTNEESIDIGNQPKDLSLAPLS
PDLLLVTFESGVVFLRDGKVVSTINLGFTVTALAVTPDGTEAIVGGQDGRLHLYSVNGDS
LTEEAVLEKHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCL
AWSPNSSMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGFADDSHVVSSGEDAC
IRVWSLTPQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggagctttccgaaacctacgcttgcgtcccatcaacggagagaggtcgagggatcctg
atctccggtgactcgaagtccgatacaatcctctacactaatggtcgatccgtcgtgatg
ctcgacctcaacaaccctttaaaggtatctatctatggggaacacgcttacccagctact
gttgcgagatactcacctaacggagagtggatcgcgtcgggtgatgtgtcggggactgtt
agaatctggggtgcttacaatgatcatgtgttgaagaaagagtttaaggttttggctggt
cggatcgatgatcttcagtggtcggctgatgggttgaggatcgttgcttctggtgatggc
aaagggaaatctcttgttcgtgctttcatatgggattcaggatcaaatgtgggagagttt
gatggacattctaggagagttcttagttgtgctatcaagccaactagaccgttccgtatt
gttacttgtggggaagatttcctggtgaatttctatgaaggtcctcctttcaagttcaag
ctctcaagcagagagcattccaactttgtcaactgtgtgaggtttgcaccagatggaagt
aagtttattactgtaagttcagataaaaaagggatcatatatgatggaaagacttgtgag
aaacttggagagctctcacctgacgatgggcataaaggtagcatctatgcagttagctgg
agtcctgatggtaaacaggtcctcactgtttctgcagacaagtcagccaaagtatgggat
atgtcagaaagcggtagcggaacattgaacacaacattgaattgtcctggatcatcaggt
ggagtggacgatatgcttgttgggtgtctgtggcagaacgatcatattgtcactgtttct
ctaggtggcacaatcagcatattctcagcaagcgatcttgataaatccccctttcaattt
tcggggcacatgaagaacgtctcttctttagctgtcctcaaaggaaacactgactacatc
ctatctggtagttatgatggtctgatatgtaaatgggtgctaggccgtggtttcagcggt
aaattgcagcggacacagaacactcaaataaagtgctttgctgctcatgaagaagagatt
gtgacctccggatatgacaatatgatatccaggatttcctataaagacgatcaatgcaca
aacgaagagtctatagacattggaaaccaaccaaaagatctaagccttgcaccactctca
ccggatctacttctggtgacctttgagtcaggagttgtgtttctccgtgatgggaaagta
gtgtcaaccatcaaccttgggttcactgtcactgctttggcagtaacacctgatggaact
gaagccatcgtcggtggccaagacggtagactccatctgtattctgttaatggcgactcc
ctcaccgaggaagcagttctcgagaaacacagaggcgccatcagcgtcatacgttactct
ccggatctctctatgtttgcatcagctgatttgaacagagaagctgttgtatgggacaga
gtctccagagagatgaagctcaagaacatgttgtaccatagcgcacgcataaactgctta
gcttggtctccaaacagcagtatggtcgctacaggatccttggacacctgtgtgattgtg
tatgaagtggacaaaccagcttcgtcaaggatgaccataaaaggagctcacttaggtgga
gtgtatggtctgggttttgctgatgattcccatgtagtgagttctggtgaagatgcttgt
atccgcgtctggagcttaactccgcaataa
DBGET
integrated database retrieval system
