Camelina sativa (false flax): 104783052
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Entry
104783052 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104783052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104783052
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104783052
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
Exonuc_VII_L
ATG17_like
Motif
Other DBs
NCBI-GeneID:
104783052
NCBI-ProteinID:
XP_010506438
LinkDB
All DBs
Position
4:28489815..28493466
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AA seq
713 aa
AA seq
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MSGFSFGQSNSVGGFSFGSSSVTNSSSAASTTSPLSFSFNQSSNPSSTGFGFGSTASSTP
ASSTPSFGFGSSASSTPSFGFGANVSSSGSAPSLFGSSTTNAAPASSPFGFVTSSASQPS
SSPFGAPSSSSASPSLSLFGASPASASSGPSSLFGSSSSLFSASSSASASSSPLFGGSSS
AAASTSPLFGAPSSATGSSLPFGVASSTSASSSSIFGATGSTPSFSVASSASGSSPSIFG
AAGSSPSIFGSSSAAGSTPSLFGSSSSGATASSPSPFGASTINPSTTTNPSPASASPFSA
STGFSFLKSTASSTTTTTASALPQTASSASSSSSSSFSFGPPASSGFNLSTGSSAAPASS
TPGAVFSIATTTTTTTTSSSTPAATSAPSAAASVMGFPSFSVSSSATNTTPASSAATFGT
TGFGSASSTPAAGSTSSFTAFAVPQTSTPASSSQPQTTTPTFSFSVPSSTSTTAPATSSA
TTTQTSLVVALSSGTSTAVAPVAGSPKLPSEITGKTVEEIIKEWNTELQERTGRFRKQAN
AIAEWDKRILQNRDVLLRLEIEVAKVVETQSSLERQLELIETHQQEVDKALQSMEEEAER
IYNDERKSLLDDEAASTRDAMYEQSELVERELEHMTEQIRSIIQSVNANQGGELEAIDGM
SPLDVVVRILNNQLSSLMWIDEKAEEFSSRIQKIASQGSSGDRELMAPKHWMS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggttttcgtttggtcaatccaattccgttggaggtttctcattcggatcttct
tccgtaactaattcctcttctgctgcatctaccacttctccgttatctttctcgtttaac
caatcttcaaaccctagctccaccgggtttggtttcggatccacggcatcatcaacccct
gcttcctcaactccttcgttcggattcggttcctctgcttcatcgactccttcatttgga
tttggagccaatgtttcttcatctggttctgcgccatctctgtttggttcatctaccacc
aatgctgctcctgcttcttctcctttcggattcgtaacttcctccgcttctcagcctagt
tcttctccgttcggagctccgtcatcctcctccgcatctccgtctttatctcttttcgga
gcttctccggcttcagcgagtagtggtccatcatctctctttggatcttcctcatcttta
ttctccgcttcttcatctgcctccgcttcgagttcacctctcttcggaggatcctcatcc
gccgctgcttcaacatctcctcttttcggcgcgccttcttcagccaccggttcgtcactt
cccttcggcgtcgcctcatcaacctctgcctcctcatcatccatctttggagccaccggc
tcgacaccttccttcagtgttgcctcatcagcctctggctcctcaccgtcaatctttgga
gcagccggttcgtcaccgtcgatctttggttcatcttcggcagcgggttcaactccgtct
ctcttcggatcgtcctcgtcaggcgcaacagcttcttcaccttccccgtttggagcatcc
accattaatccctcaactacaaccaatccctcgcctgcctcagcttctcctttctccgcg
tctaccggattctctttcttgaaaagcacagcaagttcaacaaccaccaccactgcttct
gctcttccacaaacggcttcatcagcttcctcttcttcttcttcctccttctcatttggt
ccacccgcaagttcaggctttaacctttcaaccggaagctcagcagcccctgcctctagc
acacccggagcagtgttttctattgcaaccaccaccaccactactactacgtcttcttcg
actcccgctgctactagtgcaccttcagctgcagcttctgtaatgggtttcccttctttt
agtgtgagttcatctgccaccaacaccactccggctagctctgctgctacattcggtact
acaggatttggttcggctagctcgactcctgccgctggatctactagctcctttactgcg
tttgctgtaccccagacttcaacacctgcatcatcttcacaaccacaaaccactactcct
acattctcattcagtgttccatcttcgacttctactactgctcctgctaccagttctgct
actacaacacagacatctcttgttgtggctttgagtagtgggacgagcacagctgttgct
ccagtggctggttctccaaagctgccatctgaaataactggcaaaactgttgaggagatt
atcaaggagtggaatactgagctacaagaacgcacaggaaggttccggaaacaggcaaat
gcaatagcagagtgggataagcggatcttgcaaaaccgtgatgttcttttaagacttgag
attgaagttgcaaaagtggttgaaacccaatctagcttggaaagacagctggaattaatc
gagactcatcagcaagaggttgacaaggctttgcaaagcatggaggaagaggctgagcgt
atatataatgacgagcggaaatcacttcttgacgatgaagcagcatcaactagagatgca
atgtatgaacaatctgagcttgtagaaagagaattggagcatatgactgaacaaatcaga
tcgattatacaatccgtaaatgcaaaccagggtggagaacttgaagcaatagatggaatg
agtccactggatgtagttgtaagaatcttgaacaatcaactcagttccttaatgtggatt
gatgagaaagcagaagaattctcttctcggattcagaaaatcgcatctcaaggttctagt
ggagatcgtgaattgatggctccaaagcactggatgtcttga
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