Camelina sativa (false flax): 104783110
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Entry
104783110 CDS
T05044
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104783110
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csat04812
]
104783110
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
104783110
Membrane trafficking [BR:
csat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
104783110
Cytoskeleton proteins [BR:
csat04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
104783110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
Vps4_C
AAA_22
AAA_16
TIP49
NPHP3_N
AAA_14
AAA_2
Mg_chelatase
DUF815
RNA_helicase
IstB_IS21
nSTAND3
AAA_25
ABC_tran
DUF4368
AAA_33
AAA_24
Motif
Other DBs
NCBI-GeneID:
104783110
NCBI-ProteinID:
XP_010506502
LinkDB
All DBs
Position
4:complement(28743608..28746628)
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AA seq
491 aa
AA seq
DB search
MSFLRGIIDSFSSILNEETKHDPNVSSSSSSSGSMNGIDGVPVSNERVAYKLKGYFDLGK
EEIAKGVRAEEWGLHDDALLHYRNAQRIMNEASSTPSPSYISLSEKEKVRSYREKISKWQ
NQVSERLQALGKRTGVGMSENKKTVASPSSASVSSTASRYRRTPSQKTPVPRGGIATARN
TKDAAANPKPVKESGNVHDDKLVEMINTTIVDRSPSVQWDDVAGLDGAKQALLEMVILPA
KRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEAEKL
VKALFQVAISRQPSVIFMDEIDSIMSTRSISENEASRRLKSEFLIQFDGVTSNPDDLVIV
IGATNKPQELDDAVLRRLVKRIYVPLPDSKVRTLLFKIKLKSQPHSLSGSDIDKIVRETE
GYSGSDLQALCEEAAMMPIRELGADILTIQANKVRPLRYDDFRKSMAVIRPSLSKSKWEE
LERWNSEFGSN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagttttctcagaggtataattgattcgttcagttcgatactcaacgaagaaactaag
cacgatcctaacgtatcatcatcttcgagttcgtctggctccatgaacggtattgatgga
gttccggtttctaacgaaagggttgcgtataagcttaaaggatactttgatttggggaaa
gaggagatcgctaaaggtgttagagcagaagagtggggtttacatgatgatgctcttctt
cattacagaaacgcccagaggatcatgaatgaagctagttctactccttctccttcttat
attagtttgagtgaaaaggagaaggtgagatcgtaccgagagaagatttctaaatggcag
aatcaagtatctgagagattgcaagctttgggtaagcgtacaggtgttggcatgtctgag
aataagaaaaccgtagcatctccctcttcagcttcagtttcctctacagcgtcaaggtat
agaagaactccatcacaaaagactccagttcctagaggtggcattgcaacggcaaggaac
actaaagatgctgctgcaaacccaaaacctgtgaaagaatctggaaatgtccacgatgat
aagttagtagagatgataaacacaacaatagtagatagaagcccatctgtgcagtgggat
gatgtcgctggactcgatggagctaaacaagctttgttggagatggtaattttgccggca
aaacgaagagatttattcactggtctccggagaccagcgagaggtctgcttctctttggg
ccacctggcaatggaaaaacaatgcttgccaaggcagtcgcttccgagtcacaggcaacg
tttttcaatgtctcagcatcttctttgacttcaaaatgggtgggtgaggctgaaaaacta
gttaaagcgctgtttcaagttgcaatatccaggcaaccttctgtgatatttatggatgaa
atagatagtataatgtctacaaggtcgatcagtgagaatgaagcaagcagaaggttgaaa
tcagaatttcttatccagtttgatggtgtgacttctaatcctgatgatttggtgattgtc
attggagctaccaacaagccacaggagttggatgatgcagtgcttaggagattggtgaag
agaatatatgtaccattgccagattcaaaagtcagaacactactatttaaaattaagctg
aagagtcagcctcactctttatccggtagcgacattgataaaattgtcagagaaaccgaa
ggatactcaggaagcgatcttcaagcactatgtgaagaagctgcaatgatgccaatcaga
gaactcggtgcagatattcttaccatccaagcaaataaagtgagaccgctacgatatgat
gattttcggaaatcgatggcagtgatcagacccagcttgagtaaaagcaaatgggaagag
cttgaacgttggaactcagaatttggttctaattaa
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