Camelina sativa (false flax): 104783237
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Entry
104783237 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104783237 isoform X1
KO
K24155
rabconnectin-3a
Organism
csat
Camelina sativa (false flax)
Pathway
csat04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
104783237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104783237
Membrane trafficking [BR:
csat04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104783237
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
104783237
RAVE complex
104783237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
EIF3I
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
104783237
NCBI-ProteinID:
XP_010506668
UniProt:
A0ABM0YVY9
LinkDB
All DBs
Position
4:complement(29393185..29403389)
Genome browser
AA seq
2496 aa
AA seq
DB search
MPATTSHDAISPVTDPIDNLPLRQLRSEIVPPAPTRSQSSIDWLPDFAGYSWLAYGASTL
LVISHLPSPLRGDDSTTAPFFRQILEVSGDVSSPVTSVSWSPVTPSLGELAVGSGNYIYL
FALDLNGSFCWSQNSILVQDTKVEAIEWTGSGDGIIVGGTDIVLWKKRNQSWEIAWKFSG
DHLQDLVSSTWSFEGPFATATSWSKFPAECDKAGKIVLAYYSDGVSYHKFELPHPQRISM
IQWRPMAAEQSAIGIGKSLRNVLMTCCLDGAVRLWIEVDGGKTKKGMKDVSDHKKSFCVA
AVIEINHVLDGFLGRDIFLFWGTRTGGILKTIEGTNQYFSMEKYDHEIVGKCEWLVGYGP
GNLATLWAVHCLDDVSPMRFPRVTLWAREESREIGSGSLSLANAIGSSDRLPLKKVSLLR
NNLYSTPLICSSIYLSRQNTVYWSSLHTIKSHDPEDPSAKKSSLLKCINGKLLYLDGHGG
KILQVAFDPFICEAGYTASLDSNGLIIIWSSSAHLNHAIDHPISVSSWKPCGRLQNQELR
LKYTCLCWAPSSLKDERFLLAGHVGGVDCFSVRNCGKDDNGYLTHYICTIPFAVKSPLQS
GPTSIFARTLSNSCGKTFKSNRFLLLSVWMKEKRFDALSWSVTLHHFDVAGSTCDCHFHD
FDSIGLGKWLFKDNFAGKTNCIAVRSCSSEIPESHRDNEVTSFAVVKSGRALENDVNSES
QGYTMATGQADGSLKLWRSSLQESSTPSLPWELVGMLTIGQNPVSAISLTDSGHKIAAVC
TENHSKAVRTISIWEIRHLVDSGVFILEHTSHFDAEVVAVRWSTTGNDQLLLGVCTEKEM
RVYGIARQPCKSTNLPVSDFSSEAQIWQCFAVTRTFSGIHDLWWGSIAKTCLVHNDYISL
HGQWLAVVDEKRRINDYPHIFSANLPNLVYATEEGRDSELLSNSRTNDIKEPDTASISRG
CIPQLSTSNATDDGQVKSMSLIGTAYGSDTINDITSMGHIVEKLGGALPLNHPQALLVAI
RSGNWKRASAALRHLAEYNSSSDASEKGAVKSVLCPDVLLSIYYEGSLSNGPNRKDFQWG
GTSGSVIQNSQSQSGLQSSGFFNMESYSPNSSYSSPATDLPFSGFCEQLKKLSDEGNISR
IEKLQYFAIVDLLCEISNPHSTSVYASLDEAGRRFWVSLRFKQLFVARSSGETSSLEEVD
VDSSMIGWAFHSESKENLSGSLLPNESSWQQMRSLGFGFWYSNVAQLRLRMEKLARQQYL
KKKNPRDCALLYIALNRVQVLAGLFKLSKDEKDKPLVVFLSRNFQEEKNKAAALKNAYVL
MGKHQLELAMGFFLLGGEASSAINVCVKNLQDEQLALVICRLVDGQGGALENNLINKYIL
PSAVQRGDFWLSSILKWQLGEYHQSILAVAGCLGNPVTRSSTVSSNHISFVDPSIGLYCL
MLATKNSVKNALGEKSASTLSRWATLMAATAFSRCGLPLEALECLSTSAIGHGGTHHQTG
VPSNGQLRTPEDVLEHSVPHSSNWLSSGISSTMDTHFKLGLAVQFLSRLLREATAPLMNS
EIVLCEKLSRFQHKLQTALEQFYQRFSLSSSYLREMIILSAYNRGLLSMGHNIFQENSSS
GLSDDKSHTDEDLIQYSALPKLILKATEEKSFELARIIAACSVTCLHSMPCFEENKVSSG
PEPKWSNALRFHFQGILESFSSLRTSIRLCLGSSVVDLETRLTVVLDLVEYCSRLAIAWV
LGDVNCLFRMVQPLTIAYFHGHMPYEVDLESMKRVYHHEASVSVPDASDVEVNSKVSRDV
ENNKVGYPVYSIPEDERRLVTQACFWKHVSDFVKHKLVSVSINVDGGIPNSGSSENFDAQ
ASLDSSDDIVGVTEKIMSVLGKTLINTLDQLSSYHVKQLVLVLKQKIEKRIQVPTLLWLL
ECGKSQANFRNRDIPDARIENEDNGDLAVTVRFWNLCVDPHLLYEAFLLENFDISEWSKS
KPLEDWSDMYREVTRKNGLDMPCNQDGRSSNDVASLASHASNSSQKAAITASENSAFQNP
KEIHKRTGELIEALCINAINHRQAALASNRKGIIFFNLEDGGSCTNQSDYIWSNADWPHN
GWANSESTPVPTCVSLGVGLGDKKGAHLGLGGATVGVVSLSKRGKNHRVPGYTGLGVSGL
GWETQEEFEQFIDPPPTVETVITRAFSSHPTLSLFLVGSSNTHIYLWEFGKDRATATYGV
LPAANVPPPYALASISAVQFGPCGHRFASAALDGTVCTWQSEVGGRSNIHPVESSLCFNG
HASDVEYISSSGSIVAASGYSSSGANVVVWDTLAPPSTSQASINCHEGGARSISVFDNDI
GSGSISPMIVTGGKNGDVGLHDFRYIATGKMKKQRNPDGRSSTDGDQNKNGMLWYIPKAH
LGSVTKISTIPHTSLFLTGSKDGEVKLWDAKAAKLIHHWPKLHERHTFLQPNSRGYGGII
RAGVTDIQVCPNGFITCGGDGTVKFVSLRDSYDDGK
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgacgacgagtcacgacgcgatctcaccggtcacagatccgatcgataatttg
cctctccggcaactcagatcggagatcgttccaccggctccgactcgatctcagtcttct
atcgactggcttcccgacttcgctggttactcatggcttgcttacggagcttccactctc
ctcgttatctctcatctaccttctcctctccgcggcgacgattccacgaccgcaccattt
ttccgtcagattctagaggtttccggcgatgtttcgtctccagttacttccgtttcttgg
tctcctgtaacgccgtctcttggcgagctcgctgttggctctgggaactatatctaccta
ttcgcgcttgatttgaatggttctttttgttggagtcagaattccatattggtgcaagac
acaaaagttgaagcgattgagtggacaggatccggagatgggatcatagttggtggaact
gatatcgttctgtggaagaaaaggaaccaatcttgggaaatagcttggaagttctcgggg
gatcaccttcaagatctggtttcctccacttggtcgtttgagggtccttttgcgacagca
acgtcttggagcaagtttccagctgagtgtgacaaggcaggtaaaattgtcttggcctat
tatagtgacggagtatcatatcataaattcgaattgcctcatcctcagagaatatccatg
atccagtggagaccgatggctgcagaacagtctgcaataggtatagggaaatcattgagg
aatgtgctaatgacatgttgcttggatggggcagtaaggttatggattgaggtagatggt
ggaaagacgaaaaagggcatgaaagatgtatctgatcataagaaatcattttgcgtggca
gctgtaatagagataaatcacgtcttggatggctttttgggcagagatatatttcttttt
tggggaactcgtacagggggtatattgaaaaccattgaaggtactaatcaatatttttcc
atggaaaaatatgatcatgaaatagttggcaagtgtgagtggttggtagggtacggccct
ggaaatttggctactctgtgggctgtccattgtcttgatgacgtttctcctatgaggttt
ccccgagtaacattgtgggcgagagaagaatcacgtgaaatcggttcaggatcactctct
ctagcaaatgctataggttcttctgatcgattacccctgaagaaagtttctctattgaga
aataacctttatagcacaccacttatctgctcgtcgatttatttgtctcggcagaatact
gtgtattggtcttccttgcacacaataaaatcacatgacccagaagatccatccgcaaag
aaatccagtttattgaagtgcattaatggaaaattattatatcttgatggtcatggtggg
aaaatcctacaggttgcctttgatcctttcatatgtgaggcagggtacactgcttccctg
gattctaatggtttgataataatctggtcctctagtgctcatttgaaccatgctattgac
catcctatttcagtttcctcttggaaaccttgtggacggctacagaatcaagagttaaga
ttaaagtacacatgtttatgctgggcaccttcgtcattgaaagatgagagatttctactt
gcggggcatgtaggaggggttgattgctttagtgtaaggaattgtgggaaagatgataat
ggttatctgacccattacatatgtaccattccgtttgcagtaaagagccctttgcagagt
ggtccgaccagtatatttgcaagaactctatctaattcttgtggaaagacattcaaaagt
aacagatttttgctactgagtgtatggatgaaagaaaaacggtttgatgctctgtcatgg
agtgtaaccttgcatcattttgatgtagcaggaagtacctgcgattgtcattttcatgat
tttgatagtattggattaggaaagtggttattcaaagataattttgctggtaagacgaat
tgcattgctgttagatcatgctcttcagaaatacctgaatctcaccgtgacaatgaagtt
acgagttttgctgtggtcaaaagtggtagggctctagagaatgacgtgaacagtgaaagt
caaggttatactatggcaactggtcaagctgatggctctttaaaactttggagaagtagt
ttacaggaaagttcaacaccttcccttccgtgggagcttgttggcatgcttaccattggc
caaaatcctgtcagtgctatatctctgactgattcgggacacaagatagcagccgtctgt
acagagaatcattcaaaagctgtccgcacaattagtatatgggagattagacaccttgta
gattcaggggttttcatactagagcatacgtcacattttgatgcagaggttgttgctgta
agatggtcaactacgggtaatgatcagctattgcttggagtttgcacagagaaggagatg
cgggtgtatggtattgctcggcaaccctgcaaaagtaccaatttaccggtctctgatttt
tcttcagaggcacagatttggcaatgcttcgctgttactcgtactttttctggtatacat
gatttatggtggggatccatagcgaagacttgccttgttcataatgattatattagtcta
catggtcaatggctggctgttgttgatgagaagcgaaggatcaatgactatccacacata
ttttcagccaatcttcccaacctagtttatgctacagaagaaggcagagactctgaattg
ttatctaattctcgtactaatgatattaaagaacctgatactgcatctattagcagagga
tgtattcctcaactttcaactagtaatgcaactgatgacgggcaagtcaaaagtatgtcg
ttgattgggaccgcatatggttcagatactattaatgacattacaagcatgggacatata
gtggagaagttaggaggtgccttaccacttaatcaccctcaagcccttcttgtagctata
cgttcaggcaattggaaacgagcaagtgcagctctaaggcatcttgctgaatataacagt
tcgagtgatgcctccgagaagggtgctgtaaagtcagttctttgtccagatgtccttttg
tcaatatattatgaagggtctctctccaatggcccaaatcgtaaggatttccaatggggt
gggacatctggttcagtgatacagaattcacagtctcagtcagggttgcagtcatctggt
ttctttaatatggaatcttatagtcccaacagtagttacagttcacctgcaacagacttg
ccatttagtggcttctgcgagcagctgaagaagttatcagatgaaggaaatatttccagg
atagaaaaattgcaatattttgcaattgttgaccttctttgtgaaataagtaacccacat
tctacatctgtctatgcaagtcttgatgaagctgggagaagattttgggtctcacttagg
tttaaacagctattcgtagctcgaagttctggggaaacatcatctttggaagaggtggat
gttgactctagtatgataggatgggcttttcactcagagtccaaagaaaatttatctggt
tctcttttacccaatgaatcatcatggcaacaaatgcgatcactgggttttggcttttgg
tattcaaatgtagcacaactgcgtttacgaatggagaaactggcccgacagcaatacctg
aagaaaaagaatcctagagattgtgcgcttctctatatagctttaaatagagttcaagtt
ttggctggtcttttcaaattaagcaaagatgagaaagataaacccttggtggtttttctt
tcacgcaattttcaggaggagaaaaataaggcagcagccttgaaaaatgcatatgtgctg
atgggtaaacaccaactggagctggcgatgggtttctttctccttggaggtgaagcttca
tctgcaataaatgtttgtgtgaaaaatcttcaggacgagcagcttgctctcgtaatttgc
cggcttgttgatgggcaaggtggggccctggaaaataatcttataaataaatatatactt
ccatctgctgttcaaagaggagatttttggctatcaagcattcttaagtggcaattagga
gagtaccaccagtcaattcttgctgtggctggatgtttagggaaccctgttactcggagc
tccaccgtttcttcaaatcacatctcgtttgtggatcctagtattggcctttactgcctc
atgttggcaaccaaaaatagtgtgaagaacgcactgggggaaaaaagtgcttcaactctt
agtagatgggcaaccttgatggctgctaccgccttcagcagatgtgggctcccgctcgag
gcgttagaatgtctttcaacatctgccattggtcatggtggtacccatcatcagactggc
gttccaagtaacggtcagttgcgtacaccagaagatgttcttgagcattctgttcctcat
tcgtcgaattggctatcaagcggtatttcatctactatggacactcattttaaattgggt
ttagcggtccagttcctctcaaggctcttacgggaagcaactgcaccgttaatgaattct
gaaattgttttgtgtgagaaactctcacgatttcagcataagctccaaacagctttggag
caattttaccaaagattttccctgtcttcatcttacctacgtgaaatgattattttgtca
gcatacaaccgtgggttactatccatgggacacaatatatttcaggaaaatagttcctca
ggactctcggacgacaagtctcacacagatgaagatctcatccaatattcagctttacct
aaattgattctaaaagcgactgaagagaaatcatttgaattagcacgtatcattgctgcg
tgcagtgtcacttgcttacactcaatgccatgctttgaggaaaacaaggtgtcatctgga
cctgaaccaaagtggtccaatgctttgcgatttcactttcagggaattctggaatcgttc
tctagtttaagaacatctataaggctgtgcttgggctcctctgtggtagacctggaaaca
agactcacagttgttcttgatttagtcgaatattgctcgagactcgcaatagcttgggtt
ctgggagatgtaaattgtctctttcgaatggttcagccccttacgatagcatattttcat
gggcatatgccttatgaggttgacctggaaagcatgaagagagtataccaccatgaagcc
tctgttagtgttccagatgcatcagatgtagaggttaattctaaggtcagcagagatgtt
gaaaataacaaagttggctatccagtgtactcaattccagaagatgaaagacgtcttgta
acacaagcatgtttctggaagcatgtttcagacttcgtgaaacataagctggtatctgtt
tcgatcaatgtggatggtggtatcccgaatagtggttcctctgaaaattttgatgctcag
gcatcattggactccagtgatgacattgtaggcgtaacagagaagataatgtctgttctg
ggaaaaacactgattaacacccttgatcaactctcttcctatcatgtcaaacaactagta
ttggtcttgaaacagaaaatagagaagagaattcaggttcctaccttgttatggctgctc
gaatgtgggaaatcacaagcaaattttcgtaatcgggatatcccagatgcacgtatagag
aatgaagacaacggcgacctagctgttactgtgaggttctggaatctttgtgtcgatcct
catttactgtacgaagctttcttgctagaaaattttgacatatctgagtggtcaaaatcc
aaaccactggaagattggagcgatatgtacagagaagttaccaggaagaatgggctcgac
atgccatgcaatcaagatggtcggagtagtaatgatgtggcttctcttgcaagccacgct
tcaaattcttcacagaaagctgcaataactgccagtgaaaactctgctttccagaacccc
aaagaaatccataagaggaccggggagcttatagaggccctttgtatcaatgccatcaac
catcggcaagctgcattagctagcaaccgcaagggcataattttctttaacctagaagat
ggtggttcctgcacaaaccagtcagactatatctggtcaaatgctgactggccacataac
ggttgggctaactctgagtcaactccagttccaacatgtgtctcacttggtgttggtctt
ggggacaagaaaggagcacaccttgggttaggcggggccactgttggagttgtttctctt
tccaagcgtgggaaaaatcacagagttccgggttacacgggcttaggagtctctggtcta
ggttgggaaactcaagaagaatttgaacagtttattgatcctcctccaacagttgaaact
gttattacgagagcattctccagtcacccaacattgtctctcttcttggttggctcgagc
aacacacacatttacttgtgggagtttggaaaagacagagccactgcaacttatggtgtt
ctgcctgctgcaaatgttcctccaccatatgctttggcgtcaatatcagcggtgcaattc
ggtccatgcggacaccgatttgctagcgctgcactggatggaactgtatgcacttggcaa
tcagaagttggaggaagaagcaatatccatcctgttgagtcatctctttgcttcaatggc
catgcatcagatgtagaatatattagttcgagtggatccattgttgcagcctcaggatat
agctcaagtggtgcaaacgtcgttgtatgggatactctagctccgccttcaacctcccag
gcatctatcaattgtcatgaaggtggtgcacgctctatctcagtattcgataatgacatt
ggtagtggctcaatttctcctatgattgtgactggtggcaaaaacggtgatgttggtttg
cacgatttccggtatattgcaaccggaaagatgaagaagcaaaggaaccctgacggaaga
tcgtcgactgatggagatcaaaacaagaatggcatgctttggtatataccaaaggctcac
ttagggagtgtgacgaaaatatcgacaatccctcacacaagtctgttcttgacgggaagc
aaagatggagaagttaaactgtgggatgcgaaagcagcaaagttgatacatcattggccg
aaactacacgaaagacacacttttctgcagccaaactctagaggctacggtggaatcatc
cgggctggggtgactgacatacaagtttgtccgaatggatttataacgtgcggtggtgat
ggcacggtgaagttcgtcagcctcagagattcctatgacgatggtaaataa
DBGET
integrated database retrieval system
