Camelina sativa (false flax): 104783353
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Entry
104783353 CDS
T05044
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104783353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104783353
03036 Chromosome and associated proteins [BR:
csat03036
]
104783353
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104783353
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104783353
PBAF complex
104783353
GBAF(ncBAF) complex
104783353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Phage_rep_org_N
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
104783353
NCBI-ProteinID:
XP_010506803
LinkDB
All DBs
Position
4:29931515..29934614
Genome browser
AA seq
510 aa
AA seq
DB search
MEAIDSSAELELYTIPAQSSWFLWDDIHEIERREFEEFFSESSITRTPKVYKEYRDFIIN
KFREDTSRSLTFTSIRKFLVGDVNLLQKVFLFLDKWGLINFAPSLNDNDTLSSVDNAKIE
QGTPAGIRVTATPNSLRPITAPPLVEQRTVSGIKLPPLTSYSDVFSDLKKPDDVLLCGHC
AERCDSAFYQHNKSIVNLCEKCFKNGNYGGETNAAGDFKLVGDSAAAVWTEEETLLLLES
VLKHGDDWELIAQSVSTKTRLDCISKLIELPFGEFLMGSTSGRLSSAVPTEDEDTEQVKT
DGQEHEETEMREENEDEDGPPAKRKRVALISDSDSSLVKQVATMASKVGPSVATAAAKAA
IAALCDEASCPKEIFDTGDYTDSTVDRADGDKDTDMEEQKEEKDGAQGLPVALRIKASVA
TALGAAAAQAKILADQEEREMEDLAATVIDQQLKKVQSKLKFLDQLELIMDAEEEVIEGG
KETILQERISVLQCAFRSGVTKRWDHTYVK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggaagccattgattcaagcgcagagctcgagctctacaccatccctgctcaatccagt
tggttcttatgggatgatatacacgaaattgaaagacgcgaatttgaggagttcttcagt
gagagctcaatcacaagaacccccaaagtttacaaggagtacagagatttcatcatcaat
aagtttagagaggacacttccaggagcctcaccttcaccagcatccgcaagtttctcgtc
ggcgatgtcaatttgcttcaaaaagtgtttctcttcctcgacaagtggggtttgatcaat
ttcgcaccttcccttaacgataacgatactttgtcgtcggtcgataatgctaagatcgaa
caagggactcctgctggtattcgagttaccgcaacccctaattctttgaggcctattacc
gcaccgccccttgttgagcaaagaactgtgagtggcatcaaactacctccgcttacctct
tattcagatgttttcagcgatttgaagaagccggatgatgtgttgctttgtgggcattgt
gctgaacgttgtgattctgctttctatcaacataataagagtattgtcaacttatgcgaa
aagtgtttcaagaatggcaactatgggggggagaccaacgctgcaggtgactttaagttg
gttggggattcagctgcagctgtgtggaccgaggaagaaaccctcctcttgctagaatct
gtgctgaaacatggagatgactgggaactcattgcacaaagtgtttctacaaagaccaga
ctagattgcatttcaaagctcattgagctcccgtttggagagtttctgatgggttctact
tctggaagactcagttcagctgtccccaccgaggatgaagacacagaacaggtgaaaact
gatggtcaagaacatgaggaaacagagatgagggaagaaaatgaagatgaagatgggcct
ccagcaaaaaggaaacgtgttgcactgatatcagacagtgatagttcacttgtgaaacag
gtggctaccatggcaagtaaagttggtccatctgtcgcaactgctgctgcaaaagctgca
attgcagctctttgtgatgaagcctcatgtccaaaagagatttttgacaccggtgattac
acggattccactgttgacagagccgatggagacaaagatacggatatggaggaacagaaa
gaagagaaagacggggctcagggtctacctgtagctctaaggataaaagcgtctgtggca
acagctctaggagctgcagctgctcaggcgaaaatactggctgatcaagaagaaagagaa
atggaagatttagctgcgactgtaatagaccaacagctgaagaaagtgcagagcaagttg
aagtttctggaccagttggaattgataatggatgcggaagaggaagtgatagagggtgga
aaagaaacaatcctccaagagaggattagcgttttgcaatgcgcgtttcgtagtggtgtc
accaaacgttgggatcatacgtacgtgaaatga
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