Camelina sativa (false flax): 104783514
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Entry
104783514 CDS
T05044
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104783514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104783514
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104783514
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
DUF2465
Motif
Other DBs
NCBI-GeneID:
104783514
NCBI-ProteinID:
XP_010506962
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Position
1:complement(8303835..8308327)
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AA seq
937 aa
AA seq
DB search
MEGNFEEQNKLPELKLDAKQAQGFLSFYKTLPNDSRAVRFFDRKDYYTAHGENSVFIAKT
YYHTTTALRQLGNGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTG
SPGNIGSFEDVLFANNEMQDTPVVVSIFPNFQEGRCVIGMAYVDLTRRLLGLAEFLDDSR
FTNLESSLIALGAKECIFPAESGKSNECKSLYDSLERCAVMITERKKQEFKGRDLDSDLK
RLVKGNIEPVRDLISGFDLATPALGALLSFSELLSDEGNYGNFTIRRYDIGGFMRLDSAA
MRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNAIKTRLDIVQCF
VEEAGLRQDLRQHLKRISDVERLVRSLEKRRGGLQHIIKLYQSTIRLPFIKTALEQYTGE
FSSLISERYLKKFEALSDQDHLGKFIDLVEYSVDLDQLENGEYMISASYDTTLASLKDQK
ELLEQQIHELHKKTAMELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLE
TRKDGVKFTNTKLKKLGDQYQSVVDDYKSCQKELVDRVVQTVTSFSEVFEDLALLLSEMD
VLLSFADLAASCPTPYCRPEVTSSDAGDLVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSW
FQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATNKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKKAPTLFATH
FHELTALAQANSEVAGNTVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVAEFA
NFPESVVALAREKAAELEDFSPSSMIINNEESGKRKNREDDPEEVSRGAARAHKFLKEFA
AMPLDKMELKDSLQRVREMKDELEKDAADCQWLRRFL
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaatttcgaggaacagaacaagcttccggagctgaaactggatgcaaagcag
gctcaagggttcctctccttctacaaaaccctaccaaatgactcgagagctgttagattc
tttgatcggaaggattattatacagctcatggtgagaattcagttttcatcgcaaagaca
tattatcatacaaccactgctttaaggcagcttgggaatggatcaaatgctctttcaagc
gtaagcatcagtaggaacatgtttgaaacgattgctcgggatcttctcctggagcgtaat
gaccatactgtagagctttatgaaggaagtgggtcgaattggagacttgtgaaaacaggt
tctcctggaaacattggaagctttgaagatgttttgtttgcaaacaatgaaatgcaggac
acaccagttgttgtctccatatttccaaattttcaagagggcagatgtgttatcggaatg
gcatatgttgatctgaccaggcgacttcttggactagctgagtttcttgatgatagccgc
ttcaccaatctggagtcctcactgattgctctaggtgcaaaagaatgcatttttccagct
gaatccggaaaatccaacgaatgcaaaagcctgtatgattctcttgagaggtgtgccgtg
atgataacagagaggaagaaacaggagttcaaagggcgagatttagattctgatctaaag
agactggtgaagggtaatattgaaccagttagagatttgatatccgggtttgaccttgcc
actcctgctctaggtgcattactctctttctctgaacttctctcggacgagggtaactat
gggaacttcacaatccgcagatatgatatcggtggattcatgagactcgactctgcagct
atgagggcgttgaatgtgatggagagcaaaactgatgctaataagaatttcagtttgttt
ggtctcatgaacagaacatgcactgcagggatgggtaagagactgcttcatatgtggctg
aagcaacctctcgtggatttgaatgcgatcaagacgagactagatatagttcagtgcttt
gttgaagaagctgggttaaggcaagatcttagacagcatctgaagcgaatctcagatgtt
gagaggcttgtgcggagtctcgagaaaagaagaggtggcttacagcatattatcaaactc
tatcagtcaactataaggcttcccttcatcaaaacagctctggaacagtacactggagaa
ttctcatcactcatcagcgagagatacttgaaaaagttcgaggctttatcagaccaagat
caccttggaaagttcatcgatttggtagagtactctgtagatcttgaccagctagaaaat
ggagaatacatgatatctgcaagctacgacaccacattagcatctctgaaagatcagaaa
gaattgctggagcagcagattcacgaattgcacaaaaagacggctatggaactcgatctt
caggtcgacaaggctctaaaacttgacaaagcagcgcagtttgggcatgtgtttaggatc
acgaagaaggaagagccaaagattaggaaaaagctgacgacacagtttatagtgctggag
actcgtaaagatggagtgaagttcacaaacacaaagcttaaaaaacttggggaccagtac
caaagtgttgtggacgattacaagagctgtcaaaaggagctcgttgatcgtgtagttcag
actgttaccagcttctccgaggtctttgaggacttagcattgttgctctctgaaatggat
gttttgttaagctttgctgatttggctgccagttgccctactccatactgtaggccagaa
gtcacctcttcggatgctggagatcttgtattagaaggaagcagacatccatgcgtagaa
gctcaagactgggtgaattttataccaaatgattgcagacttatgagagggaagagttgg
tttcaaatagtaacaggacctaacatgggagggaagtccactttcattcgccaggttggt
gtcattgtgctgatggctcaagttggttcctttgttccttgtgataaagcatcaatttcc
atcagagattgcatctttgcccgtgtaggagcaggcgattgccaactacgcggagtgtct
actttcatgcaagaaatgcttgaaactgcatccatattgaaaggcgctaccaacaagtca
ctgataattatcgatgaacttggtcgtggaacatcaacgtatgatggttttggtttagca
tgggctatatgtgagcatctggttcaagtgaagaaagcaccaactttgtttgctactcac
ttccatgaacttactgccttggctcaagcaaactctgaggttgctggtaacaccgttggt
gtggcaaacttccatgttagcgctcacattgacactgaaagccgcaaactcaccatgctt
tacaaggttgaaccaggggcctgtgaccagagctttgggattcatgtggcggaatttgcc
aacttccctgaaagcgtagtcgcccttgcaagagagaaagctgcagaactggaagatttc
tctccgtcttccatgataatcaacaatgaggagagtgggaagagaaagaacagagaagat
gatccagaggaagtatcgagaggggcagcgcgagctcacaagtttctgaaagaatttgca
gcaatgccgcttgataaaatggagcttaaagattcacttcaacgggtacgtgagatgaaa
gatgagctagagaaagatgctgcagactgccagtggctcaggcggttcctgtga
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