Camelina sativa (false flax): 104783887
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Entry
104783887 CDS
T05044
Name
(RefSeq) THO complex subunit 4C-like
KO
K12881
THO complex subunit 4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03015
mRNA surveillance pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104783887
09122 Translation
03013 Nucleocytoplasmic transport
104783887
03015 mRNA surveillance pathway
104783887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104783887
03041 Spliceosome [BR:
csat03041
]
104783887
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104783887
TREX complex
104783887
Spliceosome [BR:
csat03041
]
Complex C
Other components
EJC/TREX
104783887
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104783887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FoP_duplication
RRM_1
Motif
Other DBs
NCBI-GeneID:
104783887
NCBI-ProteinID:
XP_010507292
LinkDB
All DBs
Position
4:complement(15143395..15144160)
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AA seq
167 aa
AA seq
DB search
EIYAEIGELKRYAVHFDRNGRPNGSAEVVYMRRSDAMLAMKKYKNVLLDGWPMRLEILGG
NTEAAPVAAWVNVIGLNGRMKWSVFIGQGVRGGRVGRGRGSGSSMRRPATQQNQHGGGRD
GIRGRGRGAGGGRGNKNGRGRKKQVEKLAADLDKDLKSYHAEAMNIS
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
gaaatatatgctgagattggagagctgaaaagatatgcagttcactttgacaggaatgga
cgtccaaatggctcggctgaagttgtgtatatgagaagaagtgatgcaatgctagctatg
aagaaatacaagaatgtactcttggatggatggcctatgagactggagattctgggtgga
aatactgaggctgctcctgttgcagcttgggttaatgtaatcggattgaatggaaggatg
aagtggagtgtcttcattggtcaaggagttagaggtgggagagtaggaagaggaagaggc
tcaggttcttctatgagacgccctgcaacccaacaaaaccaacatggaggtggtcgagac
gggattcgtggtagaggtcgaggtgccggtggtggcagagggaataaaaacggccgaggc
agaaagaagcaggtggagaagttggctgcagaccttgacaaagatctcaaaagctatcat
gctgaagctatgaacatctcttaa
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