KEGG   Camelina sativa (false flax): 104783887
Entry
104783887         CDS       T05044                                 
Name
(RefSeq) THO complex subunit 4C-like
  KO
K12881  THO complex subunit 4
Organism
csat  Camelina sativa (false flax)
Pathway
csat03013  Nucleocytoplasmic transport
csat03015  mRNA surveillance pathway
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104783887
  09122 Translation
   03013 Nucleocytoplasmic transport
    104783887
   03015 mRNA surveillance pathway
    104783887
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104783887
   03041 Spliceosome [BR:csat03041]
    104783887
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104783887
    TREX complex
     104783887
Spliceosome [BR:csat03041]
 Complex C
  Other components
   EJC/TREX
    104783887
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104783887
SSDB
Motif
Pfam: FoP_duplication RRM_1
Other DBs
NCBI-GeneID: 104783887
NCBI-ProteinID: XP_010507292
LinkDB
Position
4:complement(15143395..15144160)
AA seq 167 aa
EIYAEIGELKRYAVHFDRNGRPNGSAEVVYMRRSDAMLAMKKYKNVLLDGWPMRLEILGG
NTEAAPVAAWVNVIGLNGRMKWSVFIGQGVRGGRVGRGRGSGSSMRRPATQQNQHGGGRD
GIRGRGRGAGGGRGNKNGRGRKKQVEKLAADLDKDLKSYHAEAMNIS
NT seq 504 nt   +upstreamnt  +downstreamnt
gaaatatatgctgagattggagagctgaaaagatatgcagttcactttgacaggaatgga
cgtccaaatggctcggctgaagttgtgtatatgagaagaagtgatgcaatgctagctatg
aagaaatacaagaatgtactcttggatggatggcctatgagactggagattctgggtgga
aatactgaggctgctcctgttgcagcttgggttaatgtaatcggattgaatggaaggatg
aagtggagtgtcttcattggtcaaggagttagaggtgggagagtaggaagaggaagaggc
tcaggttcttctatgagacgccctgcaacccaacaaaaccaacatggaggtggtcgagac
gggattcgtggtagaggtcgaggtgccggtggtggcagagggaataaaaacggccgaggc
agaaagaagcaggtggagaagttggctgcagaccttgacaaagatctcaaaagctatcat
gctgaagctatgaacatctcttaa

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