Camelina sativa (false flax): 104784059
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Entry
104784059 CDS
T05044
Name
(RefSeq) TATA-binding protein-associated factor BTAF1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104784059
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104784059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TOR1L1_N
HEAT_ECM29
ResIII
TPR_Trm732_C
HEAT_GCN1
TPR_TNPO3_IPO13_3rd
DUF7647
Motif
Other DBs
NCBI-GeneID:
104784059
NCBI-ProteinID:
XP_019099716
LinkDB
All DBs
Position
4:19539408..19549957
Genome browser
AA seq
1781 aa
AA seq
DB search
MLLSLRCTISDECTSPNFADIGNEDDIEPDGDGKWPFHSFVEQLILDMFDPAWEIRHGSV
MALREILMLHGGSAGVSTTEFSSDDGFELKEVLNKVTREREIDLNMEVSESELEPVRKRP
KIEEDPSKSYNVLEVIEGDYDINFKDEDAEFLIPPVKVNGQTNSSTVKVEPQSSFDGSSS
HTEINNVAEVNNHFEDKSFIEEPVIPKHQEENLEVLNLVKQARHSWIKNFEFLQDCTIRF
LCVLSLDRFGDYISDQVVAPVREACAQALGATFKYMSPSLIYETLNILLQMQRRPEWEIR
HGSLLGIKYLVAVRQEMLQDLLGYILPACKAGLEDCDDDVRAVAADALIPAAAAIVSLRG
QTLLSIVMLLWDILLELDDLSPSTSSVMNLLAEIYSQDDMILVMHKELSVGEEQNIDLNG
MGHVESFGERRDVKESPYALSALAPRLWPFTRHDITSVRFSAIRTLERLLEAGCRKNISE
QSKSSFWPASILGDTLRIVFQNLLLESTEEILECSERVWRLLVQCPVDDLEDAAKSYMAS
WIELAATPYGSTLDPTKMFWPVALPRKSHFKAAAKMKAVKLENEASSILGFDYARSSPSL
EKHEDASAKSTKIIVGSDMEMSVTRTRVVTASALGIFASRLREGSVQFVVDPLSSTLTSL
SGVQRQVASIVLISWFRETKCKVPSDGSGSLPEFPSPLKKWLLDLLACSDPAFPTKDKLL
PYAELSRTYTKMRNEASQLLHTVETCHCFDKLLSTNKLDVESVSADETIEFASALALWNK
ESAGNESFEKQVFEVVESSRQQLLNTAGYLKCVQSNLHITVTSLIAAAVVWMSEFPARLN
PIILPLMASIKREQEQILQQIAAEALAELIAYCVDRKPSPNDKLLKNICSLTCMDPCETP
QASIISSMDIVDDMDFLSSRNNAGKQKAKVVLAGSEDRSKVEGFITRRGSELALKHLSLK
FGGFLFDKLPKLWECLTEVLVPGIPADKQNFDLKIESISDPQVLINNIQVVRSIAPVMEE
TLKPRLLSLLPCIFKCVRHSHVAVRLAASRCVMTMAKSMTEDVMAAVVENAIPMLGDLTC
INARQGSGMLIGLLVQGLGVELVPYSPLLVVPLLRCMSDVDSSVRQSVTRSFAALVPMLP
LARGVPPPVGLSEDLSSNAEDAKFLEQLLDNSHIDDYKLCTELKVQLRRYQQEGINWLGF
LKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDEPDVFPSIIVCPSTLVGHWAFE
IEKYIDLSLLSVLQYVGSAQDRVSLREQFNNHNVIITSYDVVRKDVDYLTQFSWNYCILD
EGHIIKNAKSKITSAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQAS
YGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCDL
SPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKSSTHVFQALQYLLKLCSHP
LLVLGDKVTEPLASDLSAMINGCSDIITELHKVQHSPKLVALQEILEECGIGSDASNSDG
TLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPT
IDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRG
TLEEKVMSLQRFKVSVANTVINAENASMKTMNTDQLLDLFASAETSKKGGASSKKGSEDN
DQISGTGKGLKAILGNLEELWDQSQYTEEYNLSQFLVKLNG
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgctgctttctcttaggtgtacaatctctgacgaatgtactagtccaaattttgcagac
attgggaatgaggatgatattgagcctgatggggatggaaaatggcctttccacagtttt
gttgagcaacttattcttgacatgtttgacccggcatgggagatccgccatggaagtgta
atggctttaagagaaatattaatgcttcatggtggttctgctggagtgtcaacaacagag
tttagctcagatgatgggtttgagttgaaagaagtcttgaataaagtaacacgagaaaga
gaaatcgacttgaatatggaggtttcagaaagtgagcttgagccagttcgaaaaagacct
aagattgaggaggatccatcaaaatcatacaatgttttggaagttattgagggtgactac
gatattaattttaaagatgaagatgctgagttcttaataccaccagtgaaggtcaatggt
caaactaactccagtactgtgaaagtggaacctcaatcttcttttgatggctcgtcatct
cacactgaaataaacaatgtggcagaggttaacaatcattttgaagataagagttttatt
gaggaacctgttatacctaagcatcaggaagaaaatctcgaagtgttgaatttggttaaa
caagctaggcattcttggataaaaaattttgaatttctccaggattgcaccattcgtttc
ttatgtgtgctttcacttgatcgatttggggattacatttctgatcaggtagttgctcct
gtgcgggaagcttgtgcccaagcacttggtgctacttttaaatacatgagtccctcgttg
atttatgagacattaaatattttgcttcagatgcagcgccggcctgaatgggaaattcgt
catggaagtcttttgggcatcaagtacttggttgctgtgagacaggaaatgctccaagat
ttgcttggctatattcttccggcgtgtaaagctgggttagaggattgtgacgatgatgtg
cgagcagttgccgctgatgctcttataccggcagcagctgctattgtctctttgagagga
cagacattactctccatcgtcatgctactgtgggatattttgcttgaattggatgactta
agtccatcaaccagcagtgttatgaacctcctggcagaaatctattcccaagatgacatg
atcctggtgatgcacaaggaattatcagtaggggaggaacaaaatattgacctcaatgga
atgggtcatgtcgagagttttggagaaagaagagatgtcaaggaaagcccttacgcatta
tcagctttagcccctaggttgtggccatttacaaggcacgacatcacatcggttcgattt
tccgctattcgaactctggaacgacttcttgaagctggatgcagaaagaacatttctgag
cagtctaaaagttctttttggccagcttctattttaggggataccctgaggatcgtcttt
caaaatcttttgcttgaatcaactgaggagattctggagtgttcggagagagtgtggaga
ctgttggttcagtgcccagtggatgatttagaagatgctgcaaaatcttacatggcttcg
tggatagaacttgcagctactccttatggctccacattggatcctacaaaaatgttttgg
ccagtagctctccctcgtaagagtcatttcaaagctgctgctaagatgaaagctgttaaa
cttgagaatgaagcttccagcattctgggttttgattatgcaagaagctctccttccctt
gaaaaacatgaagatgcttctgccaagtccacgaaaattatcgtcggctcagatatggag
atgtcagtgacccgcacccgggtagttacagcatctgcattaggtatctttgcatcccga
ttgagagagggttcagtgcagtttgtggtagatccactgagtagtactcttacttctttg
tctggtgttcagcgccaggttgcgtccattgtgcttatctcttggttcagagaaactaaa
tgcaaggtcccttctgatggaagtggaagtttgcctgagtttcctagtcctcttaaaaaa
tggctcctagatttgttagcttgctcagatcctgctttccccactaaagacaaacttctt
ccttatgctgagctctcaagaacatacactaaaatgaggaatgaagcttctcagttgtta
catacagttgaaacctgccattgttttgataagttattatcaacgaataaactcgatgtg
gagagcgtgagtgctgatgagacaattgagtttgcatcagcactagctttgtggaacaaa
gaaagtgctggaaatgaatccttcgaaaagcaagtttttgaagttgtggagtcatctagg
caacagctattaaatactgctggttatttaaagtgtgtccagagtaatctacatattact
gtcacctccctgattgctgctgcagttgtttggatgtcagaatttcctgctagacttaat
ccaataatcttgccgctgatggcttcaataaaaagagagcaggaacaaatactacagcaa
atagctgcagaggctcttgcagagctcattgcttactgcgtagatcggaagccaagcccc
aatgacaagttactcaagaatatatgtagcttgacgtgcatggatccttgcgaaacacct
caagctagcattattagctctatggatattgttgatgatatggattttctgtcctcgcgg
aacaacgcaggaaaacaaaaggcaaaagtcgtgttggctggtagcgaagataggtctaaa
gttgagggttttatcacaaggagaggatctgaacttgcgttgaagcatttaagcttgaaa
tttggtggtttcttgtttgacaaacttccaaaattgtgggagtgcctcactgaggttctt
gttcctggaattcctgcagataaacagaattttgacctcaaaatagaatctatttcagat
ccacaggtcctgataaacaacatccaggtggtacgttcaatagcaccagtgatggaagaa
acattgaaacctagactgctcagtctcctgccttgtattttcaaatgcgttcgccattct
catgtggctgttagattggctgcttctagatgtgttatgacaatggctaaatcaatgaca
gaagatgtcatggcagcagtagtggaaaatgctattccaatgttgggagatttgacatgc
attaatgctagacaaggttcaggaatgcttattggtttgcttgtacaaggactgggtgta
gaactggttccgtattctcctttattggttgttcccctcctgagatgcatgagcgatgtt
gacagttcagtcaggcagagtgtgacacgtagctttgctgctcttgtacctatgcttcct
ttagcacgtggtgttccccctcctgtgggtttgagcgaagatctatctagcaatgcagag
gatgcaaaatttttggagcagttacttgacaactcccatatagatgattacaagctttgc
actgagttaaaagttcaattaagaaggtatcaacaagaaggaatcaattggttaggattt
ctgaaacgttttaagctccatggaattctctgtgatgatatggggcttggtaagacgctt
caagcatctgcaattgtggcatctgatgcagcagagcgtcgcggttcaacagatgaacca
gatgtttttccatctataattgtttgcccatcaacattagttggccattgggcatttgaa
attgagaagtatatcgacctttctctgctgagcgtgttgcagtatgttggctctgctcaa
gaccgcgtttctctccgtgaacagttcaacaaccacaatgtcattataacatcttatgat
gtggtccgcaaggatgttgattatctgacacagttttcatggaactactgtatcctggat
gaaggacacataataaagaatgctaaatctaaaattacttcagcagtaaaacaattgaag
gcccagcaccggcttatcctcagtggaacaccaatacagaataatatcatggagctgtgg
tccctttttgacttcttgatgcctggatttcttgggacagagagacagtttcaagcatct
tatggaaaaccgttgctggcagctagagatcctaaatgctctgctaaggatgctgaagcg
ggtgtattagcaatggaagcactccataagcaggttatgccattcttactccgacgtacg
aaagaagaagtcctctctgatttgccagaaaaaataattcaggacagatactgtgacctt
agtcctgtccagttgaagctttatgagcaattttctggttcaagtgctaagcaagaaata
tctagtatcataaaagttgatgggtcagcagattccggaaatgctgatgttgcgccaaca
aaatcatccacacacgttttccaggcactgcagtacctgcttaaactctgcagtcatccg
cttcttgttcttggcgataaggttacagagccgctagcttctgatttgtcagcaatgata
aatggatgttcggacataatcactgagcttcataaagtacaacactctccaaagcttgtt
gctctccaggaaattttagaagaatgtggaataggttctgatgcttccaattcagatggc
actcttagtgtaggccagcacagagttctgatatttgcacagcacaaagctttgctggat
atcattgaaaaagacttgtttcaagcccacatgaaaagtgtcacatatatgcgactagat
ggttcagttgtaccggagaagaggtttgagattgtgaaggcctttaattcagatcctaca
attgatgttctgctcctgacaacacatgttggcgggcttgggttgaatctgacctctgct
gacacacttgtatttatggagcatgattggaatccaatgcgtgatcatcaggcgatggac
agagcgcatagattgggacagaaaagagttgtaaatgtacaccgtctcataatgcgtggc
acacttgaagagaaagtgatgagtctccaaagatttaaagtgtcggttgccaatacggta
atcaatgctgagaatgcgagtatgaagacaatgaacactgatcagttacttgacttattt
gcttcagctgaaacttcgaaaaagggtggtgcatcttcgaagaagggatcagaggataat
gatcagattagtggaactggaaaaggactgaaggcaattctaggaaacttagaagaactg
tgggatcaatcacagtacacagaagagtacaaccttagccagttcttagttaagcttaac
ggataa
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integrated database retrieval system
