Camelina sativa (false flax): 104784066
Help
Entry
104784066 CDS
T05044
Name
(RefSeq) tryptophan synthase alpha chain, chloroplastic-like
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00260
Glycine, serine and threonine metabolism
csat00400
Phenylalanine, tyrosine and tryptophan biosynthesis
csat01100
Metabolic pathways
csat01110
Biosynthesis of secondary metabolites
csat01230
Biosynthesis of amino acids
Module
csat_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
104784066
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
104784066
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
104784066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
ThiG
PcrB
BtpA
NanE
Ribul_P_3_epim
NMO
FMN_dh
TMP-TENI
Motif
Other DBs
NCBI-GeneID:
104784066
NCBI-ProteinID:
XP_010507439
LinkDB
All DBs
Position
4:complement(19746650..19748927)
Genome browser
AA seq
317 aa
AA seq
DB search
MAIAFKSGVFFLQSPKTQFGFRHSSSPDSSLSFKRLTPLASLSTSSPTLGLADTFTQLKK
QGKVAFIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADGPVIQAAATRSLE
KGTNLDNILEMLDKVVPQISCPISLFTYYNPILKRGLGKFMSSIRAVGVQGLVVPDVPLE
ETEMLRKEALNNDIELVLLTTPTTPTERMKRIVDASEGFIYLVSSIGVTGARASVSGKVQ
SLLKDIKEATDKPVAVGFGISKPEHVKQIVEWGADGVIVGSAMVKLLGDANSPTPVIDDS
SHQRLPLFSLLPDRYPR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgctttcaaatccggcgtcttcttcctccaatccccaaaaacccaattcgga
ttccgccattcttcttctcctgattcatccctttctttcaagagattgactcccctggct
tctctctccacctcttctcctaccctcggtctcgctgatactttcacacagctcaaaaaa
caaggcaaagtagcattcataccgtacatcacagctggtgatccagatctctctactact
gctgaagcattgaaagttcttgacgcttgtggctctgacattatcgaattgggtgttcct
tactctgatcctttagctgatggacctgttattcaggctgcagcgacaaggtcgttggag
aagggaaccaatcttgataacatccttgagatgttagacaaggttgttccgcaaatatct
tgtccaatttcgttgttcacgtattacaacccgattcttaaacgtggattggggaagttc
atgtccagcatcagagctgttggtgtacagggacttgtggttcccgatgttcctcttgag
gaaactgagatgctgaggaaagaagcactcaacaatgacattgaactggtcttactcact
acaccaaccacgccaacagagcgaatgaagcgaattgttgacgcatcagaaggatttatt
tacctagtgagctcaattggagtgactggtgcacgagcatctgtaagcggaaaggttcag
tcgcttttgaaggatatcaaagaggccacagacaagccagtggctgttggttttggaata
tcaaagcctgagcatgtgaaacagatagttgaatggggagctgatggagtgatcgtaggc
agtgcaatggtgaagctattgggggatgcaaattcgccaacnccagtcatcgatgactcg
agtcatcaacgccttcctctcttctcattgcttcccgatcgttatccgcggtaa
DBGET
integrated database retrieval system
