Camelina sativa (false flax): 104784310
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Entry
104784310 CDS
T05044
Name
(RefSeq) polyadenylate-binding protein 8-like
KO
K13126
polyadenylate-binding protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104784310
09123 Folding, sorting and degradation
03018 RNA degradation
104784310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104784310
03041 Spliceosome [BR:
csat03041
]
104784310
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104784310
mRNA cycle factors
Stress granule specific factors
104784310
Spliceosome [BR:
csat03041
]
Complex C
Other components
Complex C specific factors
104784310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_MUD2_C
RBD_DEAH11
RRM_ACIN1
RRM_Nup35
RRM_5
F07F6_N
BRAP2
PH_35
NosL
NSRP1_N
Beta-ketacyl_N
Motif
Other DBs
NCBI-GeneID:
104784310
NCBI-ProteinID:
XP_010507660
UniProt:
A0ABM1Q6R2
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All DBs
Position
1:8911895..8913841
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AA seq
323 aa
AA seq
DB search
MDCWTWFREEQSIYEMGEEGKTSLYVGDLEPSVTDSELFDAFSHASHVSSVRVCRDLTTG
GSLGYGYVTFDYPQEAKRAMEMLNFTALKGRSIIVMYYVHYPSLLKRGVGNIFIMNLDKS
IDQKGLYDTFSCFGSILRFKLATDASGKSRGFGFVQYNTEESAHKAIEHMNGMLLNDTEV
YVGPFLQRDSPSEKATFTDIYVKNLSKSLTDEELNTIFQDFGPTTSCVIIRDGEVPQGKS
KGFGFVNFKNPEDAEKFVEALNGKKFDDKEWFVTKSKKKYQRESEVKRGLKHAVNMSQGS
SNVCVTKLDKRVTDEILKDFFSS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggattgttggacttggtttcgggaggaacagagtatttacgaaatgggtgaagaaggg
aagacttcgctgtacgttggcgatctggaaccgagcgtgacagattctgagttgttcgat
gcgtttagccatgcgagtcatgtgagctctgttcgtgtttgcagagatttgaccacaggg
ggatctcttggctatggctacgttacctttgactatcctcaagaagctaaaagagcaatg
gaaatgctgaactttactgctcttaaaggaagaagcattatagttatgtactatgtccat
tatccaagtcttctaaagcggggagttggtaatatattcataatgaatcttgacaaatcc
atcgatcaaaaaggactctacgatacattttcatgctttggatccattcttagattcaaa
ttagcgactgatgcatctggtaagtcaagaggatttggttttgtacagtacaacacggaa
gaatcagctcataaggccatagaacatatgaatggaatgcttcttaacgatacagaagta
tacgttggaccgtttcttcaaagagattctccaagcgaaaaggcaacgttcactgatatt
tatgtcaagaacctctccaagtccttgaccgatgaagagctgaacacaatttttcaagat
tttggacctacgacgagttgcgtgatcattagggatggtgaggttcctcaaggaaagtct
aaaggttttggctttgttaattttaagaatccagaggatgctgagaaatttgttgaggct
ctaaacggaaagaagtttgatgacaaggagtggtttgttactaaatctaagaagaagtat
cagagggaatctgaagtgaagcgaggtttaaaacatgctgtcaacatgtcacagggttcg
agtaacgtgtgcgttacgaagttggataaaagagtaacagatgaaatcctcaaagacttc
ttttcttcctaa
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