Camelina sativa (false flax): 104784395
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Entry
104784395 CDS
T05044
Name
(RefSeq) probable polygalacturonase At2g43860
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104784395
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104784395
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104784395
NCBI-ProteinID:
XP_010507726
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Position
4:complement(27924434..27926101)
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AA seq
405 aa
AA seq
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MVYSTSCLILPLALIFLYFILISSLADPTPTTLNVLSYGAKPDGTKDTTKAFLAAWDVAC
ASANPTTIIVPTGRFLVGNIVFQGNKCKQAPISIRIAGSIVAPGDFRVIASSEHWISFED
VTDVSIYGGILDAQGASLWECKNNGGHNCPTGAKSLGFSGSNNININGLTSINSQKFHIV
IGKSNNVNIDGVKVSADANSPNTDGIHVDSSHSVHITNSRIATGDDCISIGPGSTSVFIQ
NIKCGPGHGISIGSLGRVEEEQGVDNVTVSDVDFTGTDNGVRIKTWGKNSKSFAKNIVFQ
HINMKMVKNPIIIDQHYCLDKPCPKQESGVKVSNVRYEDIRGTSNTEMAVLLDCSKEEPC
TGIVMNNVNLVSVNRPAQATCDNANGSAKDVVPFAPCLRTEIITI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggtttacagcacttcatgtcttattcttcctttggctctcatctttctttatttcatc
ttaatctcatcattagccgatccgactccaaccacactcaacgtcttatcctacggggct
aaaccagacggcacaaaagacacaaccaaagccttcttagccgcatgggacgtcgcttgt
gcctcggctaatcctacaactattatcgtaccaacaggacggttcttggttgggaacatt
gttttccaaggcaacaagtgtaagcaagctccaatatctattcgtatagcaggctcaatt
gttgctccgggagactttagagttatcgcaagctcagaacattggatttcgtttgaggat
gttacggatgtttcaatctacggtggaatacttgacgcacaaggagccagtttatgggaa
tgcaagaacaacggtggccataattgtcctactggtgccaagagtttgggatttagtggg
tcaaataacatcaacatcaatggtttaacgtcgattaacagccagaagttccatatagtg
attggtaaaagcaataacgttaacattgacggcgttaaggtttctgctgatgcgaacagc
cctaacaccgatgggattcacgtggattcatctcactcagtccatatcacgaactcgaga
atcgcaaccggtgatgattgcatctctatcggtccaggatccactagtgttttcatacaa
aacattaaatgcggcccaggccacggcatcagtatcggaagtcttggacgagtagaggaa
gaacaaggtgtggataacgttactgtgagtgacgtggatttcacgggaacggataacgga
gttagaatcaaaacgtggggaaaaaatagcaagagtttcgctaaaaacatcgtcttccaa
catatcaatatgaaaatggtcaagaacccgatcattatagaccaacactattgtcttgac
aaaccttgccctaaacaggaatctggagttaaggtatcaaatgtgagatatgaagatata
cgtgggacttctaatacggagatggcggttttgttagattgtagtaaggaggaaccatgt
accggtattgtaatgaacaatgtgaacctcgtctccgttaatcgaccggctcaggcgact
tgcgacaatgcaaatgggtcagcgaaggacgtcgtcccgttcgctccgtgtctaaggacc
gagataattacgatttaa
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