Camelina sativa (false flax): 104784525
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Entry
104784525 CDS
T05044
Name
(RefSeq) putative indole-3-acetic acid-amido synthetase GH3.9 isoform X1
KO
K14487
auxin responsive GH3 gene family
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104784525
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GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
104784525
NCBI-ProteinID:
XP_010507858
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Position
5:212053..217533
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AA seq
639 aa
AA seq
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MCIWLNPLYIHLLALSPEAFITSLLLHLHLSSSSSSSSSSSSFIFGLTWEMDVIKLDYNY
KGDNALKEFERITSNAAEVQDNILCGILGRNKDTEYLSKYMKGPKDVLEFKRSVPIITYK
DIYPYIHRIANGEDSSLITGHRITEILCSSGTSGGEPKLMPTISEDLDRRTFLYNLIIPI
VNKYIPGLDKGKAMYLNFVKAETSTPCGIPIRSVLTSYYKSKHFQCRPYDPFNDLTSPIQ
TILCEDGNQSMYCQLLAALIQRHKVMRLGAVFASAFLRAISYLEQKWSELCEDIRSGRLN
PMITDPGCQTAMSSLLTSPNPELASEIEEICRGSSWKGILCQLWPKAKFIEAVVTGSMSQ
YIPALELFSQGKIPLVCPMYASSETYFGVNVEPLSKPSDVVFTLLPNMCYFEFIPLGKNG
TLSFDLDDDEQVPCDKVVDLVSVKLGRYYELVVTTFAGLYRYRIGDVLQVAGFYNRAPQF
RFICRRNVVLSIDLDKTNEEDLHRSITLAKKKLGSKALLLEYTSYVDTSSLPGHYVLFWE
IQGKLEPKLVEECCVAVEEELDYIYRQCRTKERSIGALEIRVVKPGTFEKLMDMIISQGG
SFNQYKTPRCVKYNSATFKLLNGHVTASFFSTRDPTWVP
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatatggctaaacccgctatatatacacctccttgctttgagtcctgaggccttc
attacctctcttcttcttcatcttcatctttcttcttcttcttcttcttcttcttcttct
tcttcttttatctttggtttaacctgggaaatggatgtaataaagcttgattataactac
aaaggtgacaatgcattaaaagagtttgagaggatcacctcgaatgctgctgaagtccaa
gataacattttatgtgggatcttaggaagaaacaaggacacagagtacttgagtaagtac
atgaaaggccctaaggacgtcttggagtttaaacgctctgtgccaatcatcacgtacaaa
gatatctatccgtacattcatagaattgctaatggagaagactcttctcttattactggc
catcgtattactgaaatattatgcagctctggtacttctggtggagagccaaagctaatg
ccgaccatttcagaagatcttgatcgccgaacttttctctacaatcttattattccaatt
gtgaacaagtacatacctggacttgacaaaggaaaagcaatgtacctaaattttgtaaaa
gctgaaacatcaactccttgtggtataccaatcagatctgtcctcactagttactacaag
agcaagcattttcaatgcagaccttatgatccattcaacgacttaaccagtccaatccaa
accatcctttgtgaagacggcaaccaaagcatgtactgtcagctactagccgctctgatt
cagcgccacaaagtgatgcgtttaggagctgtctttgcttcagcgtttctccgtgcaatc
tcttatctcgagcagaaatggagtgagctctgtgaagacatacgcagtggtcgtctgaat
cccatgatcaccgatccagggtgccaaaccgcaatgtctagtcttttaacgtcgccgaat
ccagagttagctagcgagatcgaagagatctgtagaggctcgtcgtggaaagggattctg
tgtcagctctggcctaaagcaaagttcatcgaagcagtagtgacgggatccatgtctcaa
tacataccagcacttgagctgtttagccaaggcaagattccattggtttgtccaatgtat
gcttcctctgagacttactttggagtcaacgtggaaccactctccaaaccatccgacgtt
gttttcactctcttgcctaacatgtgctacttcgagtttatacctctcggcaaaaacggg
acactctcttttgatctcgacgacgatgagcaagtcccctgtgataaggttgttgatttg
gtcagtgtcaaactcggtcgctactatgagctggtcgtcacaactttcgcaggattgtac
cgttacagaatcggcgacgtccttcaagtggcggggttctacaacagggcaccacaattc
cggtttatctgcaggagaaacgtggttctaagcatcgacttggacaaaaccaacgaagaa
gatctgcataggagcataacgttagccaagaagaagcttggcagcaaggcgttgcttttg
gagtacacgagctacgtggacacctcatcgctgccagggcactacgtgctcttctgggag
atccaagggaagctggagccgaaactggtagaagagtgttgcgtagcggttgaagaagag
ctggactatatctacagacagtgcaggacgaaagagagatcgataggggcgttagagata
agagtggtgaaaccaggaacgttcgagaaactgatggatatgattataagccaaggaggg
tcgttcaatcagtataaaacgccgagatgtgtcaagtacaacagtgcaacgttcaagctc
ttgaacggacacgtaaccgcttctttctttagcactcgtgacccgacttgggtcccgtga
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