Camelina sativa (false flax): 104784536
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Entry
104784536 CDS
T05044
Name
(RefSeq) SWI/SNF complex subunit SWI3A-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104784536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104784536
03036 Chromosome and associated proteins [BR:
csat03036
]
104784536
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104784536
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104784536
PBAF complex
104784536
GBAF(ncBAF) complex
104784536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Phage_rep_org_N
Myb_DNA-bind_7
DUF4611
Motif
Other DBs
NCBI-GeneID:
104784536
NCBI-ProteinID:
XP_010507869
LinkDB
All DBs
Position
5:complement(245830..248236)
Genome browser
AA seq
508 aa
AA seq
DB search
MEAIDSSAELELYTIPAQSSWFLWDDIHEIERREFEEFFSESSINRTPKVYKEYRDFIIN
KFREDTSRRLTFTSIRKFLVGDVNLLQKVFLFLDRWGLINFSPSLNDNDTLSSVDNAKIE
QGTPAGIRVTATPNSLRPITAPPLVEQRTVSGVKLPPLTSYSDVFTDLKKPDDVLLCGHC
GQRCDSAFYQHNKSIINICEKCFKNGNYGGENNAADDFKLVGDSAAAVWTEEETLLLLES
VLKHGDDWELIAQSVSTKTRLDCISKLIELPFGECLMGSTSGRLSSAVPTDDEDTEQVKT
DGQEHEETETREENEDGPPAKRKRVALISDSDSSLMKQVATMASKVGPSVATAAAKAAIA
ALCDEASCPKEIFDTGDYTDSTVDRADGDKDTDMEEQKEEKDEPQGLPVALRIRASVATA
LGAAAAQAKILADQEEREMEDLAATVIDQQLKKVQSKLKFLDQLELIMDAEEEVIEGGKE
TILQERISVLQCAFRSGVTKRWDHTYVK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggaagccattgattcaagcgcagagctcgagctctacaccatccctgctcaatccagt
tggttcttatgggatgatatacacgaaatcgaaagacgcgaatttgaggagttcttcagt
gagagctcaatcaatagaacccctaaagtttacaaggagtacagagatttcatcatcaat
aagtttagagaggacacttcgaggaggctcaccttcaccagcatccgcaagtttctcgtc
ggcgatgtcaatttgcttcaaaaagtgtttctcttcctcgacaggtggggtttgatcaat
ttctcaccttcccttaacgataatgatactttgtcgtcggtggataatgctaaaattgaa
caagggactcctgctggtattcgagttaccgcaacccctaattctttgaggcctattacc
gcaccgcccctggttgagcaaagaactgtgagtggcgtcaaactaccaccacttacctct
tattcagatgttttcaccgatttgaagaagccggatgatgtgttgctttgtgggcattgt
ggacaacgttgtgattctgctttctatcaacataataagagtattatcaacatatgcgaa
aagtgtttcaagaatggcaactatgggggggagaacaacgctgcagatgactttaagttg
gttggggattcagctgcagctgtgtggaccgaggaagaaaccctcctcttgctagaatct
gtgctgaaacatggggatgattgggaactcattgcacaaagtgtttctacaaagaccaga
ctagattgcatttcaaaactcattgaactcccctttggagagtgtctgatgggttctact
tctggaaggctcagttcagctgtccccaccgacgatgaagacacagaacaggtgaaaact
gatggtcaagaacatgaggaaacagagacgagggaagaaaatgaagatgggcctccagca
aaaaggaaacgtgttgcactgatatcagacagtgatagttcacttatgaaacaggtcgcg
accatggcaagtaaagttggtccatctgtcgcaactgctgctgcaaaagctgcaattgca
gctctttgtgatgaagcctcatgtccaaaagagatttttgacaccggtgattacacggat
tccactgttgacagagccgatggagacaaagatacggatatggaggaacagaaagaagag
aaagacgagcctcagggtctacctgtagctctaaggataagagcgtctgtggcaacagct
ctaggagctgcagctgctcaggcgaaaatactggctgatcaagaagaaagagaaatggaa
gatttagctgcgactgtaatagaccaacagctgaagaaagtgcagagcaagttgaagttt
ctggaccagttggaattaataatggatgcggaagaggaagtgatagagggtggaaaggaa
acaatcctccaagagaggattagcgttttgcaatgcgcgtttcgtagtggtgtcaccaaa
cgttgggatcatacgtacgtgaaatga
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