Camelina sativa (false flax): 104784541
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Entry
104784541 CDS
T05044
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like isoform X1
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104784541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104784541
Spliceosome [BR:
csat03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
104784541
Complex B
104784541
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_PARP14_3
xRRM
DUF4523
Motif
Other DBs
NCBI-GeneID:
104784541
NCBI-ProteinID:
XP_010507874
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All DBs
Position
5:complement(259973..261837)
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AA seq
250 aa
AA seq
DB search
MEMQQEANQQQGSEVSPNQTIYINNLNEKVKLDVLKKSLNDVFSHFGKILEVKAFKTLKH
KGQAWVVFEEAESASTAIAKMNDFPFYDKRMRIQYAKTKSDVVAKADGTFVPREKRKRHE
EKAGGKKKKDQHHDSTQMGMANSAYPSVYGTAPPLSQVPYPAGVKPILPEAPAPPNNILF
VQNLPHETTPMMIQMFFSQYQGFKEIRMVEAKPGIAFVEYADEMQSTVAMQGLQGFKIEQ
DPMLITYAKK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggagatgcagcaggaggctaatcaacaacaaggatcggaggtttctccgaatcagacg
atttacattaacaacctcaacgaaaaagtgaagcttgacgtgctgaagaaatcgctgaat
gatgtgttctctcacttcggaaagatactggaggtgaaggcgtttaagacgttgaagcac
aaagggcaagcttgggttgtcttcgaagaggccgagtctgcttccactgctattgccaaa
atgaatgacttccccttctacgataaacgcatgagaattcaatatgccaaaacaaagtca
gatgtggttgccaaggcggatggtacatttgttcctcgcgagaagagaaaaagacatgag
gagaaagcaggaggcaagaaaaagaaagaccagcaccatgattccacacagatgggcatg
gccaactcagcctatcccagtgtctatggaactgctcctcctctttcgcaagtaccatac
cctgctggtgttaaacccattctccccgaggcaccagctccgccaaataacatcctcttt
gtccaaaaccttcctcacgagacaactccaatgatgattcagatgttcttctcccagtac
caagggtttaaggagattaggatggttgaagccaaaccgggaatcgcctttgtggaatat
gcagatgagatgcagtcaacggtcgcaatgcagggacttcaaggtttcaagattgagcag
gacccgatgctcatcacgtatgctaagaaatag
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