| Entry |
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| Name |
(RefSeq) pre-mRNA-processing protein 40B-like
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| KO |
| K12821 | pre-mRNA-processing factor 40 |
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| Organism |
csat Camelina sativa (false flax)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:csat00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104784558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:csat03041]
104784558
Spliceosome [BR:csat03041]
Complex A
U1 snRNP components
U1 related factors
104784558
Complex B
104784558
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(9073454..9083684)
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| AA seq |
974 aa
MANNPQYPGIQPFQHPNASSLEPPRGFAPSMNFQFRPTMQAPHPDQVTRLSSHNFQSVGR
GGTMMNIGYPPQSYAPQLLQSMHHSLERPSQLNQVQPVPLGPPSLISQPNVPIASGASMP
PPYVQTPDTSMPGFGGPRALFSYPSATSYEGSRAPTQVTGPSSHSQAQSSIMNPTFEPKA
ALFQSIPSQEALTDWVEHISPDGRKYFFNKRTKRSTWEKPVELMTLFERADARTDWKEHS
SPDGRKYYYNKITKQSTWTMPEEMKIAREQAEKASVQGPYAEGIIDASKVLSRSDIASTA
APTGLPTSDASENLALSSDLKQPASVPGSSSPVENVNGVQMTADKTSLLCDIAETDGPSV
TVTKTSAATLVKKDEILVGISGDSDDMSAKNTNEGSGTAPNESQKHMVESERVESQPEEK
QILQENFSCDNKLEPGDVFKSLLKSANVGSDWTWEQAMREIINDRRYGVLRTLGERKQAF
NEFLLQMKRSAEEERLARQRKRYDEFKRMLEECVELSPSTRWSKAVTIFEDDERFKAVER
EKDRRNIFEDHVNELKEKERVKALEDRKRNIIEYRRFLESCNFIKPNSQWRKVQDRLEVD
ERCSRLEKIDQLEIFQEYLRDLEREEEERQKIQKEELKKAERKHRDEFRGLIDEHIGTGE
LTAKTSWRDYLVKVKDLPVYSAITSNSSGATPKDLFEDAVEDLKRKYHDLKSQIKDVLKL
RKVTLSGGSTFDEFKVSISEDISVPPISDLKLKLVFDDLLERAKEKEEKEARKQTRQTEN
LVDMLRSFKDITASSSWEESKHLVEGSERCRAIGDESFRKHTFEDYVSHLKEKSKRIKQN
KKVPEDVREEHDKGRDKYGRERDRVRERDSEDHHKKGATDNHNHDMNEPHGRERRRSGRD
SHNRHRERHTSVKENDTDHLKESHKAGGGHKKSRQQRGLVPEAGDEGREKRRRKEEESEK
TKEEELEDGECGRY |
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| NT seq |
2925 nt +upstreamnt +downstreamnt
atggccaataaccctcagtatcctggcattcagccattccagcatcctaatgcgagttcc
ttagaaccaccccgaggctttgctccatctatgaactttcagtttcgtcctaccatgcaa
gctccacatcctgatcaagttactcgattgtcttctcataactttcaatctgtaggaaga
ggtggcacaatgatgaacattggatatccacctcaatcttatgcacctcagttattacaa
tcaatgcaccattcccttgaaagacctagccaattaaatcaggtgcaacctgtgccactt
ggacccccatctctaatttcacagccaaatgtgccaattgcttctggtgcctccatgcct
ccgccttatgtacaaactccagatactagtatgcctggctttggtgggcctagggcactc
ttttcttatccgagtgcaacatcttacgaaggttcgagggcaccaactcaagtcactgga
ccaagcagtcatagtcaggcacaatcttcaatcatgaatccaacatttgaaccaaaggca
gctctttttcaatctataccttctcaagaggctctaacagattgggttgagcatatctct
ccggatggaaggaaatattttttcaacaagaggacaaagcggtccacttgggagaagcct
gttgagttgatgactctttttgagagagcagatgcaagaacggactggaaagaacattca
agtcctgatggaagaaagtattattacaataagattaccaagcaatcaacatggacaatg
cctgaagagatgaagattgcgcgtgaacaagcagaaaaagcatctgttcaagggccttat
gctgaaggcattattgatgcttctaaggtgctgtctcgctctgatattgcatcgactgca
gctcctactggtctaccaacctcggatgccagtgagaacctagctctttcttctgatttg
aagcagccagcttcagttcctggaagttcttctccagtcgaaaatgtcaatggagttcag
atgactgcagataaaacatcactattgtgtgatattgccgaaactgatggtccttctgtc
actgtgacgaaaacttctgctgctacattggttaagaaggatgaaattttagttgggatc
agtggagattcagatgacatgtcagccaaaaacacaaatgaaggtagtgggactgcacca
aacgaaagccaaaaacatatggtggaaagtgaaagagttgagagccaaccggaagaaaaa
caaattcttcaagagaatttttcttgtgacaataaattggaacctggggatgtattcaaa
tcacttttgaaatccgccaatgttggatctgactggacatgggaacaggccatgagagaa
attattaatgacagaagatacggtgtgctgaggactcttggagagcgtaaacaagccttc
aatgagttcttacttcaaatgaaaagatcagctgaagaggaaaggctagccagacagaga
aaacggtatgatgaatttaaaaggatgttagaggaatgtgtggagctttccccttctact
cggtggagcaaggctgtgacaatttttgaagacgatgagcgtttcaaagctgttgaaaga
gaaaaagaccgtcgtaatatttttgaagatcatgtcaatgagctaaaggagaaggagcgg
gtgaaagctcttgaggatcgcaagcggaatataattgaatacagaagatttttggaatct
tgcaatttcatcaagcctaatagtcaatggcgcaaagttcaggaccgactagaagtggat
gaacgatgttcgcgccttgagaaaattgatcagctggaaatctttcaggagtatctgcgt
gatctggagagggaagaagaggagagacagaagatacagaaggaggaactcaaaaaagca
gagcgaaagcatcgtgatgagttccgtgggctgatagatgaacatattggaacaggagag
cttactgccaaaaccagttggcgtgattatttagtgaaggtcaaagatttaccagtatat
tcagcaattacgtcgaattcatctggagctactccaaaagacttatttgaagacgctgtt
gaggatttgaaaagaaagtaccacgatctcaagtctcagataaaggatgtattgaagttg
agaaaggtaacattatccggtggatcaacatttgatgagttcaaggtctcaatttccgag
gatatcagtgtcccgcctatttcggaccttaaactaaagttagtttttgatgatttgctg
gaaagggcaaaggagaaggaagaaaaagaagccagaaaacagacacggcagactgaaaac
ttggtggatatgcttcgctccttcaaggatataactgcctcttcatcctgggaggaatca
aagcatctcgttgaaggtagtgaaagatgccgtgctattggcgatgagagctttcggaag
catacattcgaagattatgtatctcacctcaaagagaaatcaaaaaggatcaaacagaac
aagaaggtacctgaggatgtgagagaggaacatgacaaggggagagataagtacggaaga
gaaagggacagagtccgagaaagagacagtgaggatcatcataagaaaggtgcaactgat
aatcacaaccatgatatgaatgaaccccatggaagagaacgtagaagatcaggaagagat
agccataacagacatcgagaaagacatactagtgtgaaggaaaatgacacagaccatctc
aaagaatcccataaagctggtggtggccacaagaaatctagacaacagcgaggtttggtc
cctgaagcaggggatgaaggcagggaaaagcggcgtagaaaagaggaggagagtgagaaa
acaaaggaagaggagcttgaagatggagaatgtggtaggtattga |
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