Camelina sativa (false flax): 104784781
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Entry
104784781 CDS
T05044
Name
(RefSeq) AP-5 complex subunit beta-1-like
KO
K19022
AP-5 complex subunit beta-1
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104784781
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
104784781
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
RPAP3_C
Motif
Other DBs
NCBI-GeneID:
104784781
NCBI-ProteinID:
XP_010508160
LinkDB
All DBs
Position
1:9185950..9189763
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AA seq
1119 aa
AA seq
DB search
MTTTTTPEKTPARPLSIQDWDVLIDDFRDDGAPRDWFTSVFQIDSLADLALSSLLKKDFP
ITVKLSILVFLDEFSPILFDKCGNDTFDRFIDVLRTIVQSPTDGSSGLKEQAMVSFTSVL
VSIDSFSIGHVEAVVDLLLALVNRPNHGFDRQARGVACECLRQLEKAFPGLLSDVAGHLW
SLCQAERTHAVQAYLLLFTTIVYNVVHQKLKVSLLSTSVPLVPFNAPNWMRDQSLVMSQG
HQGLGPDQKELRRTLAFMLESPYLFTSCAMMEFMGMVVPLASALELQASMLRVQFLGMIY
SFDPMLCHVVLLMYTQFPDAFEGQEKEIMRRLMLFSKETQIYLVFRLLALHWLMGFLNKF
MLSGELEKRKSVLEMGQKFHPVVFDPLALKALKLDLLVQCSVSSNSLSGGDNSKSSGDLL
QECLVSVSDFKWLPPWSSETELAFRTLHKFLICSSTHSDTDPSTTRSLMESSLFQNVQGL
LVDMTLEFQILVPVIVAFIERLINCHKHQWLGERFLQKLDEKLLPKLMKNNLLTAYFPLF
HRIAENDTIPPSRLIELLTKFVISLVEKRGFDVRLKFWDQGTEVLGICRTLMSHHKSSRL
FRGLSRLLSLTCLYFPDLEVRDNARIYLRMLVCIPGQRIKNILKPADAVSPSTHSSTFFS
VQSPRFRHDPSKSRNLSAYILLERVTPLLVKQSWSLSLPSLTVGTDGYSIIENKIQVDEV
EPDDSQELQILPEARRIELGKPTLRVMDSKIGEILERLRRYFSVIPDFKHMPGIKVRITC
TLRLDAEPYSSVWGSETQNVELEKVDSPPAIFASVLKFSSSAPYGSIPSCRIPFLLGEPH
SNSNVPNEEVSLDIVLVENTLKEEEKDCLRGGAPVTVELEPREPTPGLVEVSMEANAENG
QMIQGKLESVPVGIEDMFLKALAPPGEPEDTMPSYYSDLFSALWEVCGSSSSTAHETFAL
KGGKTAAAVSGTRSVKLLEVPAETVIQATELRLAPFVVAISGDQLVNIVRDGGIIENIVW
KEEEEEGKNANAEQSSSSSVGIRGPLRLTYIGYGDDQEVPMTRSRGKMGKVKMLMFLPPR
YHLLFEMEVGEGSTLVHIRTDYWPCLAYVDDYLEALFLH
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgacgacgacgccggagaagactccggcgagacctctctctatccaggactgg
gacgttctcatcgacgacttccgagacgacggcgctcctcgcgactggttcacttccgtt
ttccagattgattctctggcggacttggctctctcgtctcttctcaagaaagacttccct
atcactgtaaagctctcaatccttgtctttctagacgagttttccccgattttgtttgat
aaatgtggtaacgatacctttgatcgattcatcgatgttctccgtacgatcgtgcaatca
ccgacggatggatcgtcgggattgaaggagcaagctatggtctctttcacctctgtgctt
gtatcgattgattctttctctataggtcacgtcgaagctgttgttgatttgcttcttgct
ctcgtgaatcgtcctaaccacgggtttgatcgacaagctcgtggcgtagcgtgtgagtgt
ttacgtcagcttgagaaagcttttcctggtttgttatctgatgtggctggtcatctttgg
tcgttgtgtcaagcggagagaactcacgctgtgcaagcttaccttcttttgttcactacg
attgtttacaacgtggttcatcagaagcttaaggtttcgcttcttagtacctctgtacct
ttggtgccttttaatgctcctaattggatgcgtgatcagagtttggttatgagtcaaggt
catcaaggattggggccagatcagaaggagctgagacgaacgctggcttttatgttggaa
tctccgtatttgtttacgtcttgtgctatgatggagtttatgggtatggttgtgccactt
gcatctgcattggagttacaggcttctatgctcagagttcagttcttggggatgatttat
tcttttgatccgatgctttgtcatgttgtcttgcttatgtatactcagttccctgatgcg
tttgagggacaagagaaagagatcatgagacgtcttatgctattttctaaggagactcag
atctatcttgttttccgtttgcttgcgctgcattggttaatgggttttctgaataagttt
atgttgagtggggagcttgagaagaggaaatctgttcttgagatgggtcagaagtttcat
cctgtggtttttgatccactcgctttgaaagcgttgaagcttgatcttctggtacaatgc
tctgttagttccaactctttgagtggaggtgataacagcaaatcttctggggatttgttg
caggaatgcttggtatcggtttcggatttcaaatggttgcctccatggagctcagaaact
gaactagcattccgcactttacacaagtttctgatatgttcatctacacattccgacact
gacccttccaccactagaagtcttatggaatctagcctcttccaaaacgtgcaggggttg
ctggtagacatgaccttggagtttcaaatcttggtccctgttattgtggcttttattgag
cggttgataaactgtcacaagcatcagtggttaggagagcggtttcttcagaaactcgat
gagaaactgcttcccaaacttatgaaaaacaacttattaacagcttacttcccgcttttc
catcggatagccgagaatgatacaatacctccttctcgattgatagagctgcttacgaag
tttgtaatttcacttgttgagaagcgggggtttgatgtgcggttgaaattttgggatcaa
ggaactgaagttcttggcatttgtcgaacactgatgagtcaccataagagctctagatta
tttcgtggactctctcgccttctttccctcacatgtctctatttccctgatctggaagtc
cgagacaacgctaggatatatttgaggatgctggtctgtataccaggacagagaattaaa
aacattttgaagcccgcagatgctgtctctccatcaactcattcttctacattctttagt
gttcaaagtcctcgttttcgtcatgatcctagcaaatctcggaacctttcagcctatatt
cttcttgaacgggttacgcccctactcgtgaaacagtcatggtcattgtctctaccatct
ctaactgttggaactgatgggtatagcattatagaaaacaaaatccaggtagatgaagtt
gagccggatgacagtcaagaactccagattttgccagaagctcgaagaattgaattagga
aaacctacgttaagggtaatggactcaaagattggagagattctagaaagattaagaagg
tatttctcagtgattcctgattttaaacacatgcctggaattaaggttaggataacctgt
actttgagattggatgctgaaccatatagcagtgtatggggaagtgaaactcagaatgtc
gagttagagaaagttgactcacctcctgcgatttttgcgagcgtgctcaaattctcatcg
tcagctccgtatggctctatcccctcatgccgcatacctttccttctcggtgagcctcat
tcgaacagcaatgtacccaacgaagaagtttctttagacatcgtcctggtagaaaacacg
ctgaaagaggaggagaaagattgcttgagaggaggagcacctgtgacagtggaactggaa
cctagagaacctacaccaggtttggtcgaggtttcaatggaagcaaatgcagaaaatggt
cagatgattcagggaaaactagagagtgtccctgtggggatcgaagacatgttcctaaaa
gctcttgctccacctggcgaacctgaagatacaatgccaagctactactctgatctattc
agtgctttgtgggaagtgtgtggttcttcatccagcacggcgcacgaaacatttgcactt
aaaggagggaaaaccgctgcagcagtcagcgggactcggtcagtaaaactgcttgaagtc
ccagcggaaactgtaatacaggccaccgagcttcggttagcgccttttgtggtggctatc
agcggagaccagcttgtaaacattgtaagagacggaggaatcatcgagaacattgtgtgg
aaggaagaagaagaggaagggaaaaacgcaaatgcagagcagtcttcatcatcctcggtg
ggaatccgaggccctcttcgtctgacatacattggatatggagatgaccaagaggttccg
atgacgaggagcagagggaaaatgggaaaggtaaagatgttgatgtttctgccgccgaga
tatcatctgctgtttgaaatggaagttggggaaggatccacattggtgcatataagaaca
gattattggccttgcttggcttatgttgatgattatttagaagctttgtttctgcactag
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