Camelina sativa (false flax): 104784832
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Entry
104784832 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104784832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104784832
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104784832
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
ATG17_like
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
104784832
NCBI-ProteinID:
XP_010508222
LinkDB
All DBs
Position
5:complement(1554666..1558465)
Genome browser
AA seq
732 aa
AA seq
DB search
MSGFSFGQSNSAGGFSFGSSSVTNSSSAASTTSPLSFSFNQSSNPSSTGFGFGSTASSST
PASSTTPSFGFGASSTTSFGFGSSASSTPSFGFGSSASSTPASSTPSFGFGANASSSGSA
PSLFGSSTTNASSPFGFVTSSASQPGSSPFGAPSSSSAAPSSSLFGAAPASASSGSSSLF
GSSSASASSSPLFGGSSSAAASTSPLFGAPSSATGSSLPFGVASSTSASSSSIFGATGST
PSFSVASSASGSSSSIFGATGSTPSFGVASSAPGSSPSIFGSAGSSPSIFGSSSAAGSTP
SLFGSSSSGATASSPSPFGVSTINPSPASASPFSASTGFSFLKSTASSTTTTTASAPPQT
ATSSSSSSFSFGPPASSGFNLSTGSSAAPASSTPGALFSIATTTTTTTSSSTPAATSAPA
SSAAASTMGFPSFSLSSSATNTTPASSTPAAGSTSSFTAFAVPPTSTPASSSQPQTTTPT
FSFSVPSSTSTTAPATSSATTTQTSLVVASSSGTSTAVAPVAGSPKLPSEITGKTVEEII
KEWNTELQERTGRFRKQANAIAEWDKRILQNRDVLLRLEIEVAKVVETQSSLERQLELIE
THQQEVDKALQSMEEEAERIYNDERKSLLDDEAASTRDAMYEQSELVERELEHMTEQIRS
IIQSVNANQGGELEAIDGMSPLDVVVRILNNQLSSLMWIDEKAEEFSSRIQKIASQGSSG
DRELMAPKHWMS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtttttcgtttggtcaatccaattccgcgggaggtttctcattcggatcttct
tccgtaactaattcatcttctgctgcatctaccacttcaccgttatctttctcctttaac
caatcttcaaaccctagctccaccggatttggtttcggatccaccgcatcgtcatcaacc
cctgcttcatccacaaccccatcgtttggattcggagcttcctcaactacttcgttcgga
ttcggttcttctgcttcatcgactccttcgtttggattcggatcctctgcttcgtcgact
cctgcttcctcaactccttcatttggatttggagccaatgcttcttcatctggttctgcg
ccgtctctgtttggttcatctaccaccaatgcttcttctcctttcggattcgtaacttcc
tcggcttctcagcctggttcttctccgttcggagctccgtcctcctcctccgcagctccg
tcttcatctcttttcggagctgctccggcttcagcgagtagtggttcatcatctctcttt
ggatcttcctcagcctccgcctcgagttcacctctcttcggaggatcctcatccgccgct
gcttcaacatctcctcttttcggcgcgccttcttcagccaccggttcgtcacttcccttc
ggcgtcgcctcatcaacctctgcctcctcatcatccatctttggagccaccggctcgaca
ccttcattcagtgttgcctcatcagcgtctggctcctcatcatccatctttggagccacc
ggctccacaccttcctttggtgttgcctcatcagcacctggctcctcaccttcaatcttt
ggatccgccggttcgtcaccgtcgatctttggttcgtcttcggcagcgggttcaactccg
tctctctttggatcgtcctcgtcaggcgcaacagcttcttcaccttccccgtttggagta
tccaccattaatccctcgcctgcctcagcttctcctttctccgcgtctaccggattctct
ttcttgaaaagcacagcaagttcgacaaccaccaccactgcttctgctcctccacaaacg
gctacctcttcttcttcttcatccttctcatttggtccacccgcaagttcaggctttaac
ctttcaaccggaagctcagcagcacctgcctctagcacacccggagcattgttttctatt
gcaaccaccaccactactactacttcttcgtcgactcccgctgctactagtgcaccagct
tcttcagctgcagcttctacaatgggtttcccttcttttagtctgagttcatctgccacc
aacaccactccggctagctcgactcctgccgctggatctactagctcctttactgcgttt
gctgtacccccgacttcaacacctgcatcatcctcacaaccacaaaccactactcctaca
ttctcattcagtgttccatcttcgacttctactactgctcctgctaccagttctgctact
acaacacagacgtctcttgttgtggcttcgagtagtgggacgagcacagctgttgctcca
gttgctggttctccaaagttgccatctgaaataactggcaaaactgttgaggagattatc
aaggagtggaatactgagctacaagaacgcacagggagattccggaaacaggcaaatgca
atagcagagtgggataagcggatcttgcaaaaccgtgatgttcttttgagacttgagatt
gaagttgcaaaagtggttgaaacccaatctagcttggaacgtcagctggaattaatcgag
actcatcagcaagaggttgacaaggctttgcaaagcatggaggaagaggctgagcgtata
tataatgacgagcggaaatcacttcttgacgatgaagcagcatcaactagagatgcaatg
tatgaacaatctgagcttgtagaaagagaattggagcatatgactgaacaaatcagatcg
attatacaatctgtaaatgcaaaccagggtggagaacttgaagcaatagatgggatgagt
ccactggatgtagttgtaagaatcttgaacaatcaactcagttccttaatgtggattgat
gagaaagcagaagaattctcttctcggattcaaaaaatcgcatctcaaggttctagtgga
gatcgtgaattgatggctccaaagcactggatgtcttga
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