KEGG   Camelina sativa (false flax): 104785142
Entry
104785142         CDS       T05044                                 
Name
(RefSeq) endoribonuclease Dicer homolog 2 isoform X1
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csat03036]
    104785142
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    104785142
   microRNA pathway
    RISC loading complex
     104785142
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer Helicase_C DEAD PAZ ResIII dsrm Cas3-like_C_2 SNF2-rel_dom AAA_22
Other DBs
NCBI-GeneID: 104785142
NCBI-ProteinID: XP_010508629
LinkDB
Position
1:complement(815114..824653)
AA seq 1397 aa
MLQMTMDADVMETETVDQAVSASPLQFARSYQVEALDKAINQNTIVFLETGSGKTLIAIM
LLRNYAYLFRKPSPSFSVFLVPQVVLVTQQAEALKMHTDLQVGMYWGDMGVDFWDSSTWK
QQVDKYEVLVMTPAILLDALRHSFLNFSMIKVLIVDECHHAGGKHPYACIMREFYHKLLN
SGTSDLPRIFGMTASLVKTKGENLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTP
RFKYYQNMELPNLKRASWVEKLEKLTMKHRLSLATLDLKSSTVDSIEKRLSRIVSTLTYC
LNDLGILLAQKAAQSLSASQNDFFLWGELNMFSLTLVKKFCSDASQAFLADIPHGRDWTV
SNIKGNVEEGLLTSKTVCLVETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNN
WKTKYVAGNNSGLQNQTRKKQNEIVEDFRKGLVNIIVATSILEEGLDVQSCNLVIRFDPA
SNICSFIQSRGRARMQNSDYLMMVESGDLLTQSRLKKYLSGGKRMREESLHHSLVPCPPL
PDDSDELSFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDINKDLGICTLYLP
KSCPVKEVKAQANGKVLKQIVCVEACIQLHEVGALSDHFVPDMVVAETVAQKLEKIHYNT
EQPCYFPPELVSQFSAQPQTTYHFYLIRMEPNSPRKFHLNDVLLGTRVELEDDIGNTGFR
LEDHKGTIAVTLSYVGAFHLTQEEVLMCRRFQITLFRVLLDHSVENLMKALDGLHLSDGV
AVDYLLVPSTYSHETSLIDWEVIRSVNLTCHKALEKHLKCSTNGASRVLHTKDGLFCTCV
VQNALVYTPHNGYVYCTNGILNNLNANSLLTKRETGDKTYIEYYEKRHGIQLKFLDEPLL
NGRHIFTLHNYLHMTKKKKEKEHDREFVELPPELCHIILSPISVDMIYSYTFIPSVMQRI
ESLLIAYNLKKSIPKVNIPTIKVLEAITTKKCQDQFHLESLETLGDSFLKYAVCQQLFQH
CRTHHEGLLSTKKDGMISNVMLCKLGCEQKLQGFIRNECFEPKGWMVPGQSSAAYTLVND
TLPEFRNIYVTSRRNLKRKSVADVVESLIGAYLSEGGELAALLFMNWVGITIDFTTTKME
RESPIQAEKLVNVGYMESLLKYKFEDKSLLVEALTHGSYMIPEIPRCYQRLEFLGDSVLD
YLITKHLYDKYPCMTPGLLTDMRSASVNNECYAQVAVKANLHKHILHASHDLHKHISRTV
SEFERSSLQSTFGWESDVSFPKVLGDVIESLAGAIFVDSGYNKSVVFASIKPLLGCMITP
ETVKLHPVRELTELCQKAQFELSTAKGFKNGEAYFTVEVKAKEMSFAHTSKASDKKLAKK
MAYKQVLNSLTESLLAS
NT seq 4194 nt   +upstreamnt  +downstreamnt
atgttacagatgacaatggatgctgatgtgatggaaactgagaccgttgatcaagccgtc
tctgcctctcctctccaatttgcaagaagttatcaggttgaggctcttgataaagctatc
aatcagaacactattgtcttcttggagactggttctggcaagacccttattgccattatg
cttcttcgtaactatgcctacctttttcgcaagccttcaccctctttctctgtcttcttg
gttcctcaagttgttcttgtcactcagcaagcagaagcactgaagatgcatactgatcta
caagttggtatgtattggggagacatgggggttgacttttgggattcttcaacttggaaa
caacaagtcgacaaatatgaggttctggtgatgacccctgccattttgctcgacgctttg
aggcatagttttctgaacttcagcatgatcaaggttctaatagttgatgaatgtcatcat
gctgggggaaagcacccctatgcttgtatcatgagggagttttatcacaaactgttaaat
tctggaacttctgatcttccgcggatatttgggatgactgcatcccttgtgaaaacaaag
ggtgaaaatctggatagctactggaagaagattcatgaactcgaaaccctaatgaattca
aaggtctatacctgtgagaatgagtctgtgctggctgggtttgtccccttctctacacca
aggttcaagtattaccagaacatggaattaccaaatctcaaacgagcaagctgggtagag
aagttagaaaaactaacaatgaagcatcgcttatcccttgcaaccttggatctcaaatcc
tctactgttgattctatagagaagagactgtcgaggatagtttcaactctaacatattgt
ttgaatgatctcggaattttgctggcgcagaaggctgctcagtcattgtcagccagtcag
aatgactttttcttgtggggcgaactaaacatgtttagcctgaccttggttaaaaaattc
tgttctgatgcttcacaggcgtttttggctgacatacctcatggtcgtgattggactgtt
tctaacattaaaggaaatgtggaggaaggtctcctaacatcaaaaacagtctgcctcgtt
gagactcttcttggttacagctccttggagaacatacggtgcatcatatttgtggatagg
gtgataacagccattgtactggaatcccttttggctgagattcttccaaattgtaataac
tggaaaaccaagtacgttgcaggaaataactctggtctgcaaaatcaaactcggaagaag
caaaatgaaattgtggaagatttccggaaaggcttggtaaacatcattgtagcaacatct
attctagaggagggtctagatgttcaaagttgcaacctggttatcagatttgaccctgca
tccaacatttgcagtttcatacagtcccgtgggcgtgcgaggatgcaaaattcagattat
ttgatgatggtggaaagcggagatctgttaacacaatctcggttgaagaaatatctttct
ggtgggaaaagaatgcgtgaggagtctttgcatcattctcttgttccctgtccacctctt
ccagatgattcagatgaactatccttccgcgtcgaaagtactggcgcaacagtaactctt
agctcaagcgtcagcctaatatatcattactgctcaaggctcccatcagatgagtacttc
aaaccagctcctagattcgatataaacaaggatctggggatttgcaccctctaccttcct
aagagctgcccagtaaaagaagttaaagctcaagcgaatggtaaagtgttaaaacaaatt
gtctgtgtagaagcttgcattcaactgcacgaagtcggagctctaagtgatcattttgtg
ccggacatggttgtggcggaaactgtcgcacaaaaactcgagaaaatccactataacaca
gaacagccatgttacttccccccagagctagtctcccagttttcagcacagccgcagaca
acataccacttctacttaataagaatggagccaaactctccaagaaaatttcatctaaac
gatgttttgctgggcactagagttgagcttgaagatgacattgggaacacaggcttcagg
ttggaagatcataagggtacaatagccgtgacattgagttatgtgggagcgtttcaccta
acacaagaggaggtccttatgtgtagaagatttcagataactcttttccgagttctttta
gatcacagtgtggaaaatttgatgaaggctttggatggattgcatcttagtgatggggta
gcagttgattatctactagttccatccacttattctcatgaaacatctcttattgattgg
gaggtgatcagatccgtgaatctaacttgtcataaagctttggaaaaacatttaaaatgt
tctaccaatggtgcttctcgcgtgctacatacaaaagacggcttgttttgtacttgtgtc
gtacaaaatgcattggtttacacaccacataacggatatgtctactgcacgaatggcatt
cttaacaatctaaacgcgaattcgttattgacgaagagagagactggcgataagacttat
attgagtactatgagaaacggcatgggattcagttaaaatttttggatgaaccgcttcta
aatggaagacacattttcacgctgcataattatctccacatgaccaagaagaaaaaggag
aaagagcatgacagagagtttgtcgaactacctcctgaactgtgtcatatcattttgtcc
ccaatatcagttgatatgatctattcatatactttcatcccatctgttatgcaacgcatt
gaatctttgcttatagcatacaacctaaagaagagcatcccaaaagtcaatattccaaca
atcaaggttctggaagctataacgacaaaaaagtgccaagatcagtttcacctggaatca
ctagaaactcttggtgactcatttctgaaatatgctgtttgtcagcaactattccaacac
tgtcgtactcaccatgagggtcttcttagcacgaagaaagatggaatgatttcaaatgtt
atgctctgcaaacttggttgtgagcagaaacttcagggatttatccgcaatgagtgtttt
gaacctaaaggttggatggttcctggtcaatcatctgcagcttatactcttgttaatgat
accctacctgagtttagaaacatatacgttactagtaggaggaatttgaaacgcaagagt
gtggctgatgttgtagaatcactaattggggcatatctcagcgagggaggtgaacttgca
gctttgttgttcatgaattgggtgggtataacgatcgatttcacaactacgaagatggaa
cgagagtccccaatacaagcagagaagcttgtgaatgttggttatatggagtcgttgttg
aaatacaaatttgaggacaagtctcttctagttgaagcattgactcatggttcatacatg
attcctgaaattccacgatgctatcagcggttggagtttctcggtgactcggtgttggat
tatctcataaccaaacatctttacgacaaatatccttgtatgactcctggactgctaacc
gacatgcgatcagcttctgttaacaatgaatgttatgctcaagtggcggtgaaagcaaac
ctgcacaaacacatcctgcatgcatctcatgatctccacaagcacatctctagaacagtc
agtgagtttgaacggtcgtctttgcaatccactttcggatgggaatccgatgtatctttt
cctaaggtccttggagatgtgatagaatctttagcaggcgccatatttgtagactcaggt
tacaacaagagtgtagtgtttgcgagcattaaaccactattaggttgtatgataactcca
gagaccgtcaagttgcatcctgtgagagagttgacagaattatgccagaaagcgcagttt
gagttgagcacagcgaaaggtttcaaaaatggtgaagcttatttcacggttgaagtgaaa
gctaaggaaatgagttttgctcacacatcaaaggcctctgataagaaattggccaagaaa
atggcttacaaacaagtcttgaattcacttacagagtctcttcttgcctcctag

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