Camelina sativa (false flax): 104785218
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Entry
104785218 CDS
T05044
Name
(RefSeq) transcription initiation factor IIB-1
KO
K03124
transcription initiation factor TFIIB
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104785218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104785218
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
104785218
Prokaryotic type
Archaeal type
TFB
104785218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
HTH_5
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
104785218
NCBI-ProteinID:
XP_010508696
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All DBs
Position
5:3279202..3281477
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AA seq
312 aa
AA seq
DB search
MSDAYCTDCKKETELVFDHSAGDTLCSECGLVLESHSIDETSEWRTFANESSNSDPNRVG
GPTNPLLADSALTTVIAKPNGSSGDFLSSSLGRWQNRNSNSDRGLIQAFKTIATMSERLG
LVATIKDRANEIYKRLEDQKSSRGRNQDALYAACLYIACRQEDKPRTIKEICVIANGATK
KEIGRAKDYIVKTLGLETGQSVELGTIHAGDFMRRFCSNLGMSNHAVKAAQEAVQKSEEF
DIRRSPISIAAVVIYIITQLSDDKKTLKDISTATGVAEGTIRNSYKDLYPHLSKIAPSWY
AKEEDLKNLSSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgcgtattgtacggattgtaagaaggagacggagttggtgttcgatcactca
gcgggagacaccctgtgctccgagtgtggtttggttttggaatctcactccatcgatgag
acctctgagtggcgtaccttcgctaacgagtcttccaacagcgatcccaaccgtgtcggt
ggtccaaccaaccctcttctcgccgatagtgctcttaccactgtcatcgctaagcccaat
ggttcctccggtgatttcttgtcttcttctctcgggaggtggcagaaccgtaactccaac
tctgatcgtggtttgattcaagcctttaaaactatcgccaccatgtctgaaagattggga
cttgttgcgactatcaaggatcgggctaatgagatatataagaggctggaggatcaaaag
tcaagcaggggaagaaatcaggatgcactttatgcagcctgcctgtacattgcctgtcga
caggaggacaagccacgaactattaaggaaatatgcgttattgccaatggggcaacaaag
aaggaaattggccgagccaaagactacattgttaaaacattgggactggagactggccag
tctgtggaactaggcactattcacgctggtgatttcatgagaaggttctgctctaacctc
gggatgtccaaccatgcggttaaagctgctcaggaagctgtgcaaaaatctgaggaattt
gatataaggaggagccctatatcaatagcggcagtggtcatttatatcataacccagctt
tctgatgacaagaagactctcaaagacatatcgacagcgacaggagtagcagaagggaca
ataaggaattcgtacaaagacttgtatccacatctgtcaaagatagcaccaagctggtat
gccaaggaagaggatctcaaaaacctctcaagtccttga
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integrated database retrieval system
