Camelina sativa (false flax): 104785373
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Entry
104785373 CDS
T05044
Name
(RefSeq) ribosome biogenesis protein BOP1 homolog
KO
K14824
ribosome biogenesis protein ERB1
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104785373
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
104785373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BOP1NT
WD40
ANAPC4_WD40
NBCH_WD40
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
104785373
NCBI-ProteinID:
XP_010508874
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All DBs
Position
5:3966976..3971116
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AA seq
759 aa
AA seq
DB search
MTKKSKGGKEDKTAIETTSKSVSGKSQKQKKPVEKEVEKELIEESGTDSDYDGDSLSGSL
NSDDFDSDIFESEDDVTQGGTEEDGGDGESSQDELLDNEGSIDNEDGEDGSEQIDSDNNE
EEDGSDEGSDRDEAVEESDSSEDEVAPRNTVGDVPLVWYKDEKHIGYDITGKKITKKERR
DKLDSFLAAMDDSKNWRKINDDYNDEEVELTKEECKMVGRLLKGEAPHADFNQYADYVDW
FKWPDAIHPLSSAPEPKRRFIPSIWEAKKVVKLVRAYRKGLIKFVKPEEEPQEGPVPYLL
WEDASTSDQKNKHLTYIPPPKLKLPGHEESYNPSLEYIPTEEEKASYELMFEEDRPKLIP
TRFTSLRSIPAYENALKESFERCLDLYLCPRIRKKRINIDPESLKPKLPSRKDLRPYPNS
CYLEYKGHTGAVTSISTDSSGQWIASGSTDGSVRIWEVETGRCLKVWQFDEPIKFVAWNP
LSSLPVLAIAMGRDLFFLNTELGNDEEQEVIKEMFHSENIPEPEASVAAIVTWLPDELYG
GIKIRHFKNISSIDWHRKGDYLSTVMASGETRGVVLHQLSKKKTQRLPFKIRGLPVCTLF
HPSLSYIFVATRKDVRVYNLLKTGLATKKLETGMREISSMAIHPGGDNLIVGSKEGKMCW
FDMDLSSKPYKTLKNHPKDITNVAVHRSYPLFASCSEDSTAYVFHGKVYNDLNQNPLIVP
LEILRGHSIKGGVLDCKFHPRQPWLFTAGADSIIKLYCH
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaagagcaaaggaggtaaagaagataagacggcgatagaaaccacaagcaaa
agcgtttctgggaaatctcagaaacagaagaaaccagttgagaaggaagtagaaaaagaa
ctgatagaagaatctggaactgattctgattacgacggtgatagtttgtccgggtctttg
aattcggatgatttcgactccgatatcttcgaatcagaagatgatgtaacacagggagga
acagaagaagatggaggagatggtgaatcatctcaagacgagctgcttgataacgagggc
tcaattgataatgaggatggtgaggatggaagtgagcaaatagatagtgataataatgag
gaagaagatgggagtgatgaaggttctgatcgagatgaagcggttgaagagagcgattcc
tctgaagatgaggttgctcctagaaatacagttggggatgttcccttggtgtggtataaa
gatgagaaacatattggttatgacatcaccgggaagaagattactaaaaaggaaagacga
gacaaacttgactcttttcttgcagctatggatgactctaagaattggcgcaaaattaat
gatgactataatgacgaggaagtggagctgactaaagaggagtgcaagatggttggtaga
ttgctcaaaggggaagctccacatgctgactttaatcaatatgcggattatgttgactgg
ttcaaatggcctgatgcaatacatccactctcaagtgcaccagaacccaagcgaaggttc
atcccttcaatatgggaggctaaaaaggttgttaagcttgttagagcataccggaagggg
ttgatcaagtttgttaagcctgaagaagagcctcaagaagggcccgttccatatctttta
tgggaagacgcttcgacttctgatcaaaagaacaagcatttaacttatattcctccaccc
aagctaaaattgccaggacacgaggagtcatacaatccttctttggaatatattccaaca
gaggaggagaaagcctcgtatgaattgatgtttgaggaagatcgtccaaaactcattcct
accaggtttacatctctgagaagcatcccagcgtatgagaatgcactgaaggagtctttt
gaacgttgtttggatctatacctatgtccgagaattcgaaagaagagaataaacatcgat
cctgaatctttgaagccgaaactacctagtaggaaggatcttagaccctatcctaactca
tgttatcttgaatataaaggccatacaggggctgttacctccatatccactgatagttct
ggccagtggatagcctcaggttcaactgatggatctgttcgtatttgggaagtggagact
ggtagatgtcttaaggtctggcagtttgatgaacctattaagtttgtggcttggaatcct
ctttccagtcttccagttttagccatcgcaatgggacgagatttgtttttcctgaacacc
gaacttgggaatgatgaggaacaggaagttattaaagagatgtttcactcagaaaacatt
ccagaaccagaagcgtctgttgctgcaattgtaacctggctaccagatgagttgtatgga
gggatcaaaatcagacattttaagaacatatcatccatagactggcaccgtaaaggagac
tatctctcaacagtgatggcatcaggcgaaacgcgaggagtggtactgcaccaactctcg
aaaaagaaaacacagaggctcccatttaagatccgtgggctgccagtctgtacactattt
catccaagcctatcttacatattcgtggcgacaagaaaggacgtgcgtgtttacaatctt
ttgaagacaggcttggccacgaaaaagcttgagacgggaatgagagaaatctcatccatg
gcgattcatccaggtggtgataatttgatagtaggaagcaaagaagggaagatgtgttgg
tttgacatggatctgtcttcaaaaccatacaagacgctaaagaatcatccgaaggacata
acgaatgtggcagttcatagatcatatccgttgtttgcgtcttgctcagaggattcaaca
gcttacgtattccatgggaaggtgtataatgatctgaaccagaatcctctgattgtgccg
ttggagattctaagaggtcattctattaaaggaggagtcttggactgcaagttccaccca
agacaaccatggctattcaccgcaggggctgactcaataatcaaactctattgccattaa
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