Camelina sativa (false flax): 104785441
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Entry
104785441 CDS
T05044
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 4
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104785441
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104785441
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104785441
03019 Messenger RNA biogenesis [BR:
csat03019
]
104785441
03041 Spliceosome [BR:
csat03041
]
104785441
Enzymes [BR:
csat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104785441
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
104785441
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104785441
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104785441
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104785441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
104785441
NCBI-ProteinID:
XP_010508959
UniProt:
A0ABM0Z144
LinkDB
All DBs
Position
5:complement(4328206..4330198)
Genome browser
AA seq
321 aa
AA seq
DB search
MATTTTTQGQQTAIDTAVLDDIIKRLTEVRLARPGKQVQLSEAEIKQLCTTARDICLQQP
NLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPSANYLFLGDYVDRGKQSLETICLLLAY
KIKYPGNFFLLRGNHECASINRIYGFYDECKRRFNVRVWKVFSDCFNCLPVAALIDDKIL
CMHGGLSPELNHLDEIRNLPRPTMIPDNGLLCDLLWSDPGKDVKGWGANDRGVSYTFGPD
KVSEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENLM
CSFQILKPAEKKTKFMMSTKI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacgacgacgacgcaggggcaacaaacggcgattgacacggcggttcttgat
gatataatcaaacgactcacggaggttcggttagctagaccgggaaaacaagtccagctc
tctgaagctgaaatcaaacagctctgtactacagctcgtgatatttgtcttcagcaaccc
aatttgcttgaacttgaagcacccatcaaaatttgtggtgacatacatgggcagtatagt
gatttgctgaggctattcgagtacggtggtttccctcctagtgctaattatctgtttctg
ggggactatgtggacagaggcaaacagagtcttgaaacaatatgtcttttacttgcttac
aagatcaagtaccctgggaacttttttctactaaggggcaaccacgagtgtgcttctatc
aatcggatttatgggttttatgatgaatgtaaaaggaggtttaatgtgagggtatggaag
gttttctcagattgctttaattgtcttcctgttgcggcgcttatagatgacaaaatactg
tgtatgcacggtggactttcccctgagcttaatcatttggatgagattaggaacttgcct
cgtccaactatgattccggacaatgggttgctctgtgatttgctttggtctgatcctggt
aaagatgttaaaggatggggagcgaatgatagaggggtttcgtacacttttggtcctgat
aaagtctctgagtttcttacgaaacatgatcttgaccttgtgtgccgtgcccatcaggtc
gtggaggatggctatgagttctttgctgataggcaactcgtgacggtgttttcagctcct
aactactgtggcgaatttgataatgctggtgcgatgatgagcgtggacgagaaccttatg
tgctcatttcagattttgaagcctgctgaaaagaagaccaaattcatgatgtccacaaag
atttga
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