Camelina sativa (false flax): 104785519
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Entry
104785519 CDS
T05044
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial isoform X1
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03030
DNA replication
csat03410
Base excision repair
csat03420
Nucleotide excision repair
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104785519
03410 Base excision repair
104785519
03420 Nucleotide excision repair
104785519
03440 Homologous recombination
104785519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csat03032
]
104785519
03400 DNA repair and recombination proteins [BR:
csat03400
]
104785519
Enzymes [BR:
csat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104785519
DNA replication proteins [BR:
csat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
104785519
DNA repair and recombination proteins [BR:
csat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
104785519
NER (nucleotide excision repair)
GGR (global genome repair) factors
104785519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
104785519
NCBI-ProteinID:
XP_010488034
LinkDB
All DBs
Position
19:10818817..10825906
Genome browser
AA seq
1046 aa
AA seq
DB search
MGVSLRHLSPSSFWVSRRPRVSSSSSILSFLVPRRRIISRKIAIINGNSGYSTATTDCGG
SHGFQHSGHQRSSSVEFSGEWKLNLGSKTARMVPPTVKQAGAVSAWRDEVNNFRGRNGEH
ANNNQDDAFGNGSYYFKGFVPKIDDVQSYGNGQNFDYKLKQGSDITTLDRELNGFMQTNS
IRRPVVALPSKDIEAEGKTDMTLRGDKDTHGKQRPLNSDSSLDNASYKKSATVSQVEKCT
NLSKVRANLKKIYERVFVVDDAYTAKKTVAKLMNEYRNLVHACDTEVSRIDVKTETPVDH
GEMICFSLYCGSEADFGDGKSCIWVDLLGESGRDILAEFKPFFEDSSIKKVWHNYSFDHH
IIRNYGIKLSGFHGDTMHMARLWDSSRRISGGYSLEALTSDPRVLGGTETKEEAELFGKI
SMKKIFGKGKLKKDGSEGKLVVVPPVEELQKDDREAWISYSALDSISTLKLYESMKKQLQ
VKQWFLDGHLISKKNMFDFYQEYWQPFAELLAKMEAEGILVDRDYLAQIEIVAKAEKEIA
VSRFRNWASKHCPDAKHMNVGSDTQLRQLFFGGITNSCNGEDLPYEKLFKVPNVDKVIEE
GKKTATKFRNIKLHRISDNPLPTEKFTASGWPSVSGDTLKALAGKVSAEYDYTDGVLDTS
LEENTGDDDFISLPDEILETQHSNTSDESNTSAYGTAFDAFGGGESGKEACHAIAALCEV
CSIDSLISNFILPLQGSNVSGKDGRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIR
QAFIASPGNSLIVADYGQLELRILAHLTGCKSMMEAFIAGGDFHSRTAMNMYPHIREAVE
NGEVLLEWHPQPGQEKPPVPLLKDAFASERRKAKMLNFSIAYGKTAVGLSRDWKVSREEA
QETVDLWYNDRQEVRKWQELRKKEAIKNGYVVTLLGRARKFPVYRSRAQKNHIERAAINT
PVQGSAADVAMCAMLEISTNQCLKELGWKLLLQIHDEVILEGPSESAENAKDIVVKCMSE
PFNGKNILSVDLSVDAKCAQNWYAGK
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgggggtttctcttcgtcacctctctccttcctctttctgggtttcgcgtcgtcctcgt
gtttcttcttcttcttcaattctttcttttcttgtgcctcgccgtagaatcatttccagg
aaaatagctatcatcaatggaaattctggatattccactgctactactgattgtgggggt
tcccatggatttcagcattcgggtcatcaacggtcgtcctctgttgagtttagtggagag
tggaaacttaatttgggttcgaagacggcaagaatggttccgccaactgtgaaacaagct
ggagctgtgagtgcttggagggatgaagtcaataacttcagaggaagaaatggcgaacat
gctaacaacaaccaagatgatgcttttggtaacggcagttattatttcaaaggctttgtc
cctaaaatagatgatgtccagtcttatggaaacggccagaactttgattacaagctgaag
caaggaagtgatattaccacacttgatagagaattgaatggatttatgcaaactaatagt
ataagaagaccggtcgttgcattaccaagcaaggatattgaggctgaggggaaaacagac
atgactctgagaggagataaggatacacatggaaaacaaagacctcttaacagtgactcg
tctcttgacaatgcaagctataagaaatcagcaaccgtttcccaagtggaaaaatgcacc
aacctgtcgaaagtccgagcaaacctcaagaaaatatatgagagagtttttgttgttgat
gatgcgtatactgcaaagaaaaccgtggctaagctcatgaatgaatataggaatcttgtc
catgcttgcgatacagaggtgtccaggattgatgtgaagactgaaacacctgtggaccat
ggggagatgatatgtttcagtttatattgtggatcagaagcagattttggagatggaaaa
tcatgtatctgggtagatttgcttggcgaaagtggaagggatatcttggctgagtttaag
ccatttttcgaagactcatcaataaaaaaagtatggcataactacagctttgatcaccac
attatcagaaattatggaatcaagctttctggttttcatggtgatacgatgcacatggca
cgattgtgggattcatctagacggatatctggtggttattcgctcgaagcacttacaagt
gacccaagagttcttgggggaactgagacaaaggaggaagcagaattatttggtaaaata
tcaatgaagaagattttcggcaagggaaaactgaaaaaagatggatcagaggggaaattg
gtggtcgttcctcctgttgaagagctacaaaaagacgatcgagaagcttggatttcctac
tcggcgttggattcgataagcacactaaagctttatgagagcatgaagaaacaactgcaa
gtgaagcaatggtttcttgatggacatctcatttcaaaaaagaacatgtttgatttctac
caagaatattggcagccttttgctgagcttcttgccaaaatggaagcggaaggaattctt
gtagatagggattatttggcgcagattgagattgtagccaaagcagaaaaagaaattgct
gtttcgaggttccgaaattgggcttcaaaacattgtccagatgcgaagcatatgaatgtt
ggcagtgacacgcaattgcgacaactcttttttggtggcattactaacagttgtaatggt
gaggatcttccatatgaaaaacttttcaaagttcctaatgttgataaggtgattgaagaa
ggaaaaaagacagcgacaaagttccgcaatatcaaactgcataggattagcgacaatcct
ctacctactgaaaagttcactgcctcaggctggccctctgttagtggagacaccttgaaa
gccttagctgggaaagtctctgcagaatatgactatacggatggcgttttagatacttct
ctagaagaaaacactggagatgatgattttatttcgctaccagatgaaattttagaaaca
caacactccaatacctctgatgaatcaaatacatctgcttatggaacagcatttgatgcg
tttggagggggtgaaagtggaaaggaggcttgccatgctattgccgcactatgtgaagtt
tgctccattgattccttaatatcaaattttattcttcctttgcagggaagtaatgtatca
ggaaaagatggtcgtgtccactgctccctgaatattaacactgaaactggtcgcttatcg
gctagaaggccaaatttgcagaaccaacctgcattggagaaagatcggtacaagatccgt
caggccttcatagcatcaccaggaaattcacttattgttgctgattatggacagctggaa
cttaggattctagcacatcttactggttgcaaaagcatgatggaagctttcatagctggt
ggagacttccactcgagaacagccatgaatatgtatccacatattcgtgaagctgttgaa
aatggtgaagtgctccttgaatggcatccacaacctggacaggagaagccgccagtgcca
ttattgaaggatgcctttgcttctgagagaagaaaagcaaagatgcttaacttctcgatt
gcgtatgggaagaccgctgttggactttctagagattggaaggtttcaagagaagaagct
caagaaacagttgatctctggtataatgatagacaagaagtccgcaaatggcaagaacta
cgcaagaaagaagctataaaaaatgggtatgtagtcactttgttgggaagggctcgtaaa
ttccctgtataccgttcacgtgcccagaagaaccatatcgaacgagcagcaatcaacact
cctgttcagggaagcgcggctgatgttgctatgtgcgctatgctggagatatcaacaaat
caatgtctcaaagagcttggttggaaattgcttctacaaattcatgatgaagtaattttg
gaaggacctagtgagtcagcggagaatgctaaagacatagtagtgaaatgcatgagtgaa
cccttcaacggcaagaatattctctcagtcgacttatctgttgatgctaagtgtgctcag
aactggtatgctggcaaataa
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integrated database retrieval system
